Commits · 72e9a9c97e40cbd4f1aa5233f658ddcf2a354a8b · Andrei-Claudiu Roibu / BrainMapper · GitLab

08 Sep, 2020 3 commits
- fixed bug where the path was passed to pkl not the df · 72e9a9c9
  Andrei Roibu authored Sep 08, 2020
  
  72e9a9c9
- fixed output_database_handle ref before assignment bug · 78f6ad04
  Andrei Roibu authored Sep 08, 2020
  
  78f6ad04
- added ability to calculate statistics for test set · 815f5223
  Andrei Roibu authored Sep 08, 2020
  
  815f5223
02 Sep, 2020 1 commit
- wrote evaluate data function which evaluates all data and saves it as an h5 db · 01d776d1
  Andrei Roibu authored Sep 02, 2020
  
  01d776d1
21 Aug, 2020 1 commit
- added cross-domain x2x y2y x2y options to mapping eval · 8cbb592b
  Andrei Roibu authored Aug 21, 2020
  
  8cbb592b
19 Aug, 2020 1 commit
- commented out calls to matplotlib.plt to prevent cluster errors · 10eab075
  Andrei Roibu authored Aug 19, 2020
  
  10eab075
14 Aug, 2020 1 commit
- added minus one flag · db5226f5
  Andrei Roibu authored Aug 14, 2020
  
  db5226f5
30 Jul, 2020 1 commit
- added volume cropping to reduce storage and network req + inc speed · 8d308d99
  Andrei Roibu authored Jul 30, 2020
  
  8d308d99
29 Jul, 2020 1 commit
- updated imports, added shrinkage · 26a7f66b
  Andrei Roibu authored Jul 29, 2020
  
  26a7f66b
21 Jul, 2020 1 commit
- added mean subtraction back as an option · 1e1a86bb
  Andrei Roibu authored Jul 21, 2020
  
  1e1a86bb
17 Jul, 2020 1 commit
- added new scaling based on uk biobank stats · 3447ca2a
  Andrei Roibu authored Jul 17, 2020
  
  3447ca2a
15 Jul, 2020 1 commit
- updated correlation evaluation · 3b1b237b
  Andrei Roibu authored Jul 15, 2020
  
  3b1b237b
13 Jul, 2020 1 commit
- added regression for evaluation · f5d7e08b
  Andrei Roibu authored Jul 13, 2020
  
  f5d7e08b
02 Jul, 2020 1 commit
- eliminated deprecated functions, updated branch for AE · aeb4decd
  Andrei Roibu authored Jul 02, 2020
  
  aeb4decd
29 May, 2020 1 commit
- added correlation evaluation, scaling for evaluation · a817b485
  Andrei-Claudiu Roibu authored May 29, 2020
  
  a817b485
07 May, 2020 1 commit
- added input/output scaling, fixed overfitting network save, delete old checkpoints · 15ffbc18
  Andrei-Claudiu Roibu authored May 07, 2020
  
  15ffbc18
01 May, 2020 2 commits
- fixed bug: mask now selecting right channel + being passed to cpu · 7e359259
  Andrei-Claudiu Roibu authored May 01, 2020
  
  7e359259
- added masking network outputs and demeaning targets · 2ab6e668
  Andrei-Claudiu Roibu authored May 01, 2020
  
  2ab6e668
29 Apr, 2020 2 commits
- added masking to eval path, eliminated batch option, set min_max to none in loading · 5e6bb054
  Andrei-Claudiu Roibu authored Apr 29, 2020
  
  5e6bb054
- added visual indication of current volume being mapped · d189eaa8
  Andrei-Claudiu Roibu authored Apr 29, 2020
  
  d189eaa8
28 Apr, 2020 3 commits
- bug fixes · 52785b10
  Andrei-Claudiu Roibu authored Apr 28, 2020
  
  52785b10
- fixed fslpy Image import bug · 39935616
  Andrei-Claudiu Roibu authored Apr 28, 2020
  
  39935616
- debugged eval-mapper, added del for past checkpoints, fixed bugs · e3f6a179
  Andrei-Claudiu Roibu authored Apr 28, 2020
  
  e3f6a179
04 Apr, 2020 1 commit
- updated docstrings, pep8 formated, fixed bugs · 7eacf841
  Andrei-Claudiu Roibu authored Apr 04, 2020
  
  7eacf841
03 Apr, 2020 6 commits
- function params calls cleanup · 987c425f
  Andrei-Claudiu Roibu authored Apr 03, 2020
  
  987c425f
- eliminated targets_directory call from evaluation · 550dc688
  Andrei-Claudiu Roibu authored Apr 03, 2020
  
  550dc688
- added function for evaluating on all 3 paths · 010773a3
  Andrei-Claudiu Roibu authored Apr 03, 2020
  
  010773a3
- added evaluation for multiple paths · 8171f623
  Andrei-Claudiu Roibu authored Apr 03, 2020
  
  8171f623
- completed evaluation on single path function · 7520de29
  Andrei-Claudiu Roibu authored Apr 03, 2020
  
  7520de29
- added function that generates a new volume · 9345f994
  Andrei-Claudiu Roibu authored Apr 03, 2020
  
  9345f994
01 Apr, 2020 2 commits
- fixed typo bugs · df98fe17
  Andrei-Claudiu Roibu authored Apr 01, 2020
  
  df98fe17
- added evaluatio function based on dice score · 76965ce7
  Andrei-Claudiu Roibu authored Apr 01, 2020
  
  76965ce7
30 Mar, 2020 1 commit
- added dice score calculator function · 6ef6d440
  Andrei-Claudiu Roibu authored Mar 30, 2020
  
  6ef6d440