Commits · 92f1b83df24d766b12ab5d4e091f9e2047e9fbf9 · Andrei-Claudiu Roibu / BrainMapper · GitLab

19 Oct, 2020 1 commit
- Merge branch 'autoencoder' into 'master' · 92f1b83d
  Andrei-Claudiu Roibu authored Oct 19, 2020
```
Autoencoder

See merge request !2
```
  92f1b83d
21 Jul, 2020 4 commits
- prepared execution of first VA code + fixed bugs · 159001d8
  Andrei Roibu authored Jul 21, 2020
  
  159001d8
- deleted nibabel + h5py, and fixed torch version · 1515a03b
  Andrei Roibu authored Jul 21, 2020
  
  1515a03b
- added mean subtraction back as an option · 1e1a86bb
  Andrei Roibu authored Jul 21, 2020
  
  1e1a86bb
- added logs folder to ignore · 9fb4dd1c
  Andrei Roibu authored Jul 21, 2020
  
  9fb4dd1c
17 Jul, 2020 1 commit
- added new scaling based on uk biobank stats · 3447ca2a
  Andrei Roibu authored Jul 17, 2020
  
  3447ca2a
15 Jul, 2020 9 commits
- added dropout for testing in all layers · e37a0fe0
  Andrei Roibu authored Jul 15, 2020
  
  e37a0fe0
- formated code · 590e1b32
  Andrei Roibu authored Jul 15, 2020
  
  590e1b32
- corrected code bugs preventing database creation · afffad8e
  Andrei Roibu authored Jul 15, 2020
  
  afffad8e
- deleted labels generator call · 019ecb82
  Andrei Roibu authored Jul 15, 2020
  
  019ecb82
- updated correlation evaluation · 3b1b237b
  Andrei Roibu authored Jul 15, 2020
  
  3b1b237b
- added multiple losses, · f7e0e7b2
  Andrei Roibu authored Jul 15, 2020
  
  f7e0e7b2
- eliminated 2x pandas entry & pytorch version condition · cc8a04ca
  Andrei Roibu authored Jul 15, 2020
  
  cc8a04ca
- added AdamW optimiser · 35db07b6
  Andrei Roibu authored Jul 15, 2020
  
  35db07b6
- commented out new weight initialisation for testing · f5eb75d8
  Andrei Roibu authored Jul 15, 2020
  
  f5eb75d8
13 Jul, 2020 4 commits
- deleted print functions · b1633c87
  Andrei Roibu authored Jul 13, 2020
  
  b1633c87
- fixed saving function · 9a088f2f
  Andrei Roibu authored Jul 13, 2020
  
  9a088f2f
- added regression for evaluation · f5d7e08b
  Andrei Roibu authored Jul 13, 2020
  
  f5d7e08b
- increased number of resblocks to 10 · 04708c08
  Andrei Roibu authored Jul 13, 2020
  
  04708c08
10 Jul, 2020 4 commits
- corrected weight initiation for PReLU · 1de05ff6
  Andrei Roibu authored Jul 10, 2020
  
  1de05ff6
- script for computing BBwide statistics · 9f6e9cb1
  Andrei Roibu authored Jul 10, 2020
  
  9f6e9cb1
- added pandas dataframe management · 97a4ebaf
  Andrei Roibu authored Jul 10, 2020
  
  97a4ebaf
- replaced mean subtraction with mean regression, fixed data file reader · cb9bbda3
  Andrei Roibu authored Jul 10, 2020
  
  cb9bbda3
02 Jul, 2020 7 commits
- added code for calculating the linear regression weights · 209ce07e
  Andrei Roibu authored Jul 02, 2020
  
  209ce07e
- new function for calculating the mean across subjects · 221ddd6d
  Andrei Roibu authored Jul 02, 2020
  
  221ddd6d
- now also returning subject number in directory reader · 5931e6e6
  Andrei Roibu authored Jul 02, 2020
  
  5931e6e6
- Update README.md · a15b9d15
  Andrei-Claudiu Roibu authored Jul 02, 2020
  
  a15b9d15
- Delete BrainMapperUNet - deprecated architectures for AE branch · 45eb4429
  Andrei-Claudiu Roibu authored Jul 02, 2020
  
  45eb4429
- deleted UNet network load calls · 8403dee0
  Andrei Roibu authored Jul 02, 2020
  
  8403dee0
- eliminated deprecated functions, updated branch for AE · aeb4decd
  Andrei Roibu authored Jul 02, 2020
  
  aeb4decd
29 May, 2020 9 commits
- added modules for AE and scaling for UNet · bd5515dc
  Andrei-Claudiu Roibu authored May 29, 2020
  
  bd5515dc
- introduced min delta for early stopping · 9ca11f63
  Andrei-Claudiu Roibu authored May 29, 2020
  
  9ca11f63
- added several forms of data scaling · f214cf4c
  Andrei-Claudiu Roibu authored May 29, 2020
  
  f214cf4c
- loss per epoch is not the mean, absolute change is printed · f5c757b6
  Andrei-Claudiu Roibu authored May 29, 2020
  
  f5c757b6
- added correlation evaluation, scaling for evaluation · a817b485
  Andrei-Claudiu Roibu authored May 29, 2020
  
  a817b485
- improved early stopping logging · 319f99f6
  Andrei-Claudiu Roibu authored May 29, 2020
  
  319f99f6
- improved settings layout + added AE settings · 75530d88
  Andrei-Claudiu Roibu authored May 29, 2020
  
  75530d88
- added AE network + option to run & evaluate in one run · 0997b994
  Andrei-Claudiu Roibu authored May 29, 2020
  
  0997b994
- added autoencoder version inspired by cGAN · 11e183d7
  Andrei-Claudiu Roibu authored May 29, 2020
  
  11e183d7
10 May, 2020 1 commit
- updated settings file - easier mods during experiments · 8449e9c9
  Andrei-Claudiu Roibu authored May 10, 2020
  
  8449e9c9