Commits · a1a5c9348fbc2de930b7e0884fb08d33addec7eb · Andrei-Claudiu Roibu / BrainMapper · GitLab

30 Mar, 2020 5 commits
- added dice score calculation and plotting · a1a5c934
  Andrei-Claudiu Roibu authored Mar 30, 2020
  
  a1a5c934
- added logs for loss per iteration and epoch · 1a6a8939
  Andrei-Claudiu Roibu authored Mar 30, 2020
  
  1a6a8939
- wrote a log function for adding messages to logger · 2d53f299
  Andrei-Claudiu Roibu authored Mar 30, 2020
  
  2d53f299
- built constructor, defined functions · 054f064b
  Andrei-Claudiu Roibu authored Mar 30, 2020
  
  054f064b
- added tensorboardX · 2b37d7b3
  Andrei-Claudiu Roibu authored Mar 30, 2020
  
  2b37d7b3
28 Mar, 2020 8 commits
- placeholder for data logger during training · a2514e0a
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  a2514e0a
- worte the training function - need to add logger! · af29f33a
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  af29f33a
- added a device flag to predict · 16642040
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  16642040
- fixed an inport bug · 89a2e5fb
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  89a2e5fb
- finished building constructor · f63736f4
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  f63736f4
- added folder creation function · 0c62c469
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  0c62c469
- added dice and combined crossentropy-dice losses · fc18699b
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  fc18699b
- added L1, L2 and CrossEntropy losses · 999def81
  Andrei-Claudiu Roibu authored Mar 28, 2020
  
  999def81
27 Mar, 2020 8 commits
- built data loaders, started writing solver call · 32db8f36
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  32db8f36
- defined class, wrote constructor and def functions · 3c9ed801
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  3c9ed801
- created file with multiple potential loss classes · be48e402
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  be48e402
- added torch import - fixed bug · ef285c19
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  ef285c19
- wrote the get_datasets function · 186328d1
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  186328d1
- added h5py to requirements · 3742f2ff
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  3742f2ff
- created DataMapper helper subclass of data.Dataset · 2eb696b5
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  2eb696b5
- wrote the data loader function · c4d7d0ad
  Andrei-Claudiu Roibu authored Mar 27, 2020
  
  c4d7d0ad
26 Mar, 2020 1 commit
- initial commit of run function architecture · c87661ce
  Andrei-Claudiu Roibu authored Mar 26, 2020
  
  c87661ce
25 Mar, 2020 13 commits
- created a post-training prediction function · f72471db
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  f72471db
- added test for parameters being on stored on GPU · ea6e15b8
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  ea6e15b8
- added save function · c2c88a53
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  c2c88a53
- deleted redundant enable_test_dropout function · 4917a5c2
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  4917a5c2
- deleted enable_test_dropout - redundant function · 42ae0d12
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  42ae0d12
- wrote the forward function for U-net · 397a0fc0
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  397a0fc0
- created constructor function for UNet · 74c4b384
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  74c4b384
- changed classifier block parent module: nn.Module · 328192ce
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  328192ce
- created init file to define utils as package dir · fb9b7bb2
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  fb9b7bb2
- created the structure for the U-net file · 2f498e71
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  2f498e71
- updating doctring for tractSum · 9c4903d5
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  9c4903d5
- updating local repository · dcb3716f
  Andrei-Claudiu Roibu authored Mar 25, 2020
  
  dcb3716f
- constructed classifier block · d8b4134c
  Andrei Roibu authored Mar 25, 2020
  
  d8b4134c
24 Mar, 2020 5 commits
- added a simple decoder block · f79ee18a
  Andrei Roibu authored Mar 24, 2020
  
  f79ee18a
- added basic encoder block · 44d4b76d
  Andrei Roibu authored Mar 24, 2020
  
  44d4b76d
- created a generic convolutional block · e1f84662
  Andrei Roibu authored Mar 24, 2020
  
  e1f84662
- addded module description · 2ca55334
  Andrei Roibu authored Mar 24, 2020
  
  2ca55334
- relaxed requirement for pip · 33be347f
  Andrei Roibu authored Mar 24, 2020
  
  33be347f