Commits · ca61c82145ff98657d206eeb2db85a31a996e424 · Andrei-Claudiu Roibu / BrainMapper

14 Aug, 2020 2 commits
- added flag for tanh/sig/none change · ca61c821
  Andrei Roibu authored Aug 14, 2020
  
  ca61c821
- added flag for [-1,1] scaling allowing for unscaled volumes + updated scaling params · b79d46ce
  Andrei Roibu authored Aug 14, 2020
  
  b79d46ce
10 Aug, 2020 1 commit
- added flag for AdamW use · 11b9a3b8
  Andrei Roibu authored Aug 10, 2020
  
  11b9a3b8
07 Aug, 2020 2 commits
- bug fixes + added no epochs as a parser var · ab7a80b4
  Andrei Roibu authored Aug 07, 2020
  
  ab7a80b4
- added argument for using last checkpoing in command line · 68fc4520
  Andrei Roibu authored Aug 07, 2020
  
  68fc4520
31 Jul, 2020 5 commits
- fixed if-bug in reset parameters · 41956de8
  Andrei Roibu authored Jul 31, 2020
  
  41956de8
- deleted print statement · 9a385a85
  Andrei Roibu authored Jul 31, 2020
  
  9a385a85
- added flags for network transf blocks & weight init + ask for network name for custom settings · e615a4c6
  Andrei Roibu authored Jul 31, 2020
  
  e615a4c6
- fixed checkpoint loader · a897de36
  Andrei Roibu authored Jul 31, 2020
  
  a897de36
- added settings call for number of res blocks and the use of custom weights · 91ecfd99
  Andrei Roibu authored Jul 31, 2020
  
  91ecfd99
30 Jul, 2020 1 commit
- added volume cropping to reduce storage and network req + inc speed · 8d308d99
  Andrei Roibu authored Jul 30, 2020
  
  8d308d99
29 Jul, 2020 12 commits
- bug fixes · 2d2cd6eb
  Andrei Roibu authored Jul 29, 2020
  
  2d2cd6eb
- adding tracts population mean · 5e5d88cc
  Andrei Roibu authored Jul 29, 2020
  
  5e5d88cc
- separeted data preprocessing from main run call, added storing as hdf5 database · 214a3932
  Andrei Roibu authored Jul 29, 2020
  
  214a3932
- moved all data preprocessing functions to preprocessor.py · 29d9668e
  Andrei Roibu authored Jul 29, 2020
  
  29d9668e
- updated imports · f3926d2d
  Andrei Roibu authored Jul 29, 2020
  
  f3926d2d
- updated imports, added shrinkage · 26a7f66b
  Andrei Roibu authored Jul 29, 2020
  
  26a7f66b
- created common_utils for creating folders - easier importing · 10ce17b4
  Andrei Roibu authored Jul 29, 2020
  
  10ce17b4
- updated imports, moved use_last_checkpoint call · df4eeb88
  Andrei Roibu authored Jul 29, 2020
  
  df4eeb88
- added nibabel and h5py libs · ee991fd1
  Andrei Roibu authored Jul 29, 2020
  
  ee991fd1
- moved settings reader to utils folder · 46cc992a
  Andrei Roibu authored Jul 29, 2020
  
  46cc992a
- updated data parameters to only call data · 71f2c433
  Andrei Roibu authored Jul 29, 2020
  
  71f2c433
- updated imports, removed k-fold + data shuffling · 2ab1cdfe
  Andrei Roibu authored Jul 29, 2020
  
  2ab1cdfe
21 Jul, 2020 4 commits
- prepared execution of first VA code + fixed bugs · 159001d8
  Andrei Roibu authored Jul 21, 2020
  
  159001d8
- deleted nibabel + h5py, and fixed torch version · 1515a03b
  Andrei Roibu authored Jul 21, 2020
  
  1515a03b
- added mean subtraction back as an option · 1e1a86bb
  Andrei Roibu authored Jul 21, 2020
  
  1e1a86bb
- added logs folder to ignore · 9fb4dd1c
  Andrei Roibu authored Jul 21, 2020
  
  9fb4dd1c
17 Jul, 2020 1 commit
- added new scaling based on uk biobank stats · 3447ca2a
  Andrei Roibu authored Jul 17, 2020
  
  3447ca2a
15 Jul, 2020 9 commits
- added dropout for testing in all layers · e37a0fe0
  Andrei Roibu authored Jul 15, 2020
  
  e37a0fe0
- formated code · 590e1b32
  Andrei Roibu authored Jul 15, 2020
  
  590e1b32
- corrected code bugs preventing database creation · afffad8e
  Andrei Roibu authored Jul 15, 2020
  
  afffad8e
- deleted labels generator call · 019ecb82
  Andrei Roibu authored Jul 15, 2020
  
  019ecb82
- updated correlation evaluation · 3b1b237b
  Andrei Roibu authored Jul 15, 2020
  
  3b1b237b
- added multiple losses, · f7e0e7b2
  Andrei Roibu authored Jul 15, 2020
  
  f7e0e7b2
- eliminated 2x pandas entry & pytorch version condition · cc8a04ca
  Andrei Roibu authored Jul 15, 2020
  
  cc8a04ca
- added AdamW optimiser · 35db07b6
  Andrei Roibu authored Jul 15, 2020
  
  35db07b6
- commented out new weight initialisation for testing · f5eb75d8
  Andrei Roibu authored Jul 15, 2020
  
  f5eb75d8
13 Jul, 2020 3 commits
- deleted print functions · b1633c87
  Andrei Roibu authored Jul 13, 2020
  
  b1633c87
- fixed saving function · 9a088f2f
  Andrei Roibu authored Jul 13, 2020
  
  9a088f2f
- added regression for evaluation · f5d7e08b
  Andrei Roibu authored Jul 13, 2020
  
  f5d7e08b