diff --git a/doc/fsl.data.rst b/doc/fsl.data.rst index 1bad68deaad7cbc01b0fd3fd3ecbb9b328cd41fb..f564da940dd5413c89cd8761263f2c064583b0ca 100644 --- a/doc/fsl.data.rst +++ b/doc/fsl.data.rst @@ -12,6 +12,7 @@ fsl.data.featdesign fsl.data.featimage fsl.data.fixlabels + fsl.data.freesurfer fsl.data.gifti fsl.data.image fsl.data.imagewrapper @@ -21,6 +22,7 @@ fsl.data.mghimage fsl.data.vest fsl.data.volumelabels + fsl.data.vtk .. automodule:: fsl.data :members: diff --git a/doc/fsl.rst b/doc/fsl.rst index c8e5bb1184aec4dfedf8d91ce65bbd715a5d28e9..fb702bca8580962ba9fd1da2a06c2e895efa767a 100644 --- a/doc/fsl.rst +++ b/doc/fsl.rst @@ -8,6 +8,7 @@ fsl.scripts fsl.utils fsl.version + fsl.wrappers .. automodule:: fsl :members: diff --git a/doc/fsl.utils.rst b/doc/fsl.utils.rst index 41f3669ebcb07bbd7ffbe73bee59c4cb56543c50..f460cbfb3575f7145326defeab98987df135972c 100644 --- a/doc/fsl.utils.rst +++ b/doc/fsl.utils.rst @@ -10,6 +10,7 @@ fsl.utils.idle fsl.utils.imcp fsl.utils.memoize + fsl.utils.meta fsl.utils.naninfrange fsl.utils.notifier fsl.utils.path diff --git a/doc/fsl.wrappers.bet.rst b/doc/fsl.wrappers.bet.rst new file mode 100644 index 0000000000000000000000000000000000000000..a2c46e9d168e7f17fea2c2a6f6179c4df17789f7 --- /dev/null +++ b/doc/fsl.wrappers.bet.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.bet`` +==================== + +.. automodule:: fsl.wrappers.bet + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.eddy.rst b/doc/fsl.wrappers.eddy.rst new file mode 100644 index 0000000000000000000000000000000000000000..406bdb5b62eb4c8f78ff327ff759b88cff5a14b5 --- /dev/null +++ b/doc/fsl.wrappers.eddy.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.eddy`` +===================== + +.. automodule:: fsl.wrappers.eddy + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.flirt.rst b/doc/fsl.wrappers.flirt.rst new file mode 100644 index 0000000000000000000000000000000000000000..855758af9743d8cd7c6a9b9158b66b37490ae8e1 --- /dev/null +++ b/doc/fsl.wrappers.flirt.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.flirt`` +====================== + +.. automodule:: fsl.wrappers.flirt + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.fnirt.rst b/doc/fsl.wrappers.fnirt.rst new file mode 100644 index 0000000000000000000000000000000000000000..5fc0a992beece50f437b09c556eb1ef36b573430 --- /dev/null +++ b/doc/fsl.wrappers.fnirt.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.fnirt`` +====================== + +.. automodule:: fsl.wrappers.fnirt + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.fslmaths.rst b/doc/fsl.wrappers.fslmaths.rst new file mode 100644 index 0000000000000000000000000000000000000000..22c697ec706512af248066b4bdd2496c63a53a47 --- /dev/null +++ b/doc/fsl.wrappers.fslmaths.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.fslmaths`` +========================= + +.. automodule:: fsl.wrappers.fslmaths + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.fugue.rst b/doc/fsl.wrappers.fugue.rst new file mode 100644 index 0000000000000000000000000000000000000000..93d4501409c1eaabd3820aac0241680d7fd61b6f --- /dev/null +++ b/doc/fsl.wrappers.fugue.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.fugue`` +====================== + +.. automodule:: fsl.wrappers.fugue + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.melodic.rst b/doc/fsl.wrappers.melodic.rst new file mode 100644 index 0000000000000000000000000000000000000000..2400879c74e2c95df578509bbe4cf8dd1cd49c60 --- /dev/null +++ b/doc/fsl.wrappers.melodic.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.melodic`` +======================== + +.. automodule:: fsl.wrappers.melodic + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.misc.rst b/doc/fsl.wrappers.misc.rst new file mode 100644 index 0000000000000000000000000000000000000000..fb3015f410211ea623b0fd162bd6e5103feee244 --- /dev/null +++ b/doc/fsl.wrappers.misc.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.misc`` +===================== + +.. automodule:: fsl.wrappers.misc + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.rst b/doc/fsl.wrappers.rst new file mode 100644 index 0000000000000000000000000000000000000000..4c9a2950e928ab2c7524465f6f05846ece5194ec --- /dev/null +++ b/doc/fsl.wrappers.rst @@ -0,0 +1,20 @@ +``fsl.wrappers`` +================ + +.. toctree:: + :hidden: + + fsl.wrappers.bet + fsl.wrappers.eddy + fsl.wrappers.flirt + fsl.wrappers.fnirt + fsl.wrappers.fslmaths + fsl.wrappers.fugue + fsl.wrappers.melodic + fsl.wrappers.misc + fsl.wrappers.wrapperutils + +.. automodule:: fsl.wrappers + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/fsl.wrappers.wrapperutils.rst b/doc/fsl.wrappers.wrapperutils.rst new file mode 100644 index 0000000000000000000000000000000000000000..27e13abb0490ddb79c54fa519ddec0803e2931d9 --- /dev/null +++ b/doc/fsl.wrappers.wrapperutils.rst @@ -0,0 +1,7 @@ +``fsl.wrappers.wrapperutils`` +============================= + +.. automodule:: fsl.wrappers.wrapperutils + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/mock_modules.txt b/doc/mock_modules.txt index 8004b2a20cb994326fddbd334e1f3d206357397b..8bb6c230a3289007c59d160f6b6ec1cb7572b809 100644 --- a/doc/mock_modules.txt +++ b/doc/mock_modules.txt @@ -1,6 +1,7 @@ deprecation nibabel nibabel.fileslice +nibabel.freesurfer numpy numpy.linalg scipy