diff --git a/fsl/data/atlases.py b/fsl/data/atlases.py
index b28eb952c98ccbda29f2097ca8eda9ae660cba4c..b34499d17555a3386ea52da4198ce5e21d3b79ad 100644
--- a/fsl/data/atlases.py
+++ b/fsl/data/atlases.py
@@ -54,7 +54,7 @@ import fsl.data.image                     as fslimage
 import fsl.data.constants                 as constants
 from   fsl.utils.platform import platform as platform
 import fsl.utils.image.resample           as resample
-import fsl.utils.transform                as transform
+import fsl.transform                      as transform
 import fsl.utils.notifier                 as notifier
 import fsl.utils.settings                 as fslsettings
 
diff --git a/fsl/data/featanalysis.py b/fsl/data/featanalysis.py
index 7c38eb7773465fa79cc952e4038c38451e7e3b97..fbaaf694244c19045d37a45c2bc9ecd53038777a 100644
--- a/fsl/data/featanalysis.py
+++ b/fsl/data/featanalysis.py
@@ -42,16 +42,16 @@ The following functions return the names of various files of interest:
 """
 
 
-import                        collections
-import                        logging
-import os.path             as op
-import numpy               as np
+import                   collections
+import                   logging
+import os.path        as op
+import numpy          as np
 
-import fsl.utils.path      as fslpath
-import fsl.utils.transform as transform
+import fsl.utils.path as fslpath
+import fsl.transform  as transform
 
-from . import image as fslimage
-from . import          featdesign
+from . import image   as fslimage
+from . import            featdesign
 
 
 log = logging.getLogger(__name__)
diff --git a/fsl/data/image.py b/fsl/data/image.py
index 96d918e5ca2bd7643168340b7fa62b9379bffefb..b706ee1003f85914455bbab77eefa9e45dead14b 100644
--- a/fsl/data/image.py
+++ b/fsl/data/image.py
@@ -46,7 +46,7 @@ import nibabel           as nib
 import nibabel.fileslice as fileslice
 
 import fsl.utils.meta        as meta
-import fsl.utils.transform   as transform
+import fsl.transform         as transform
 import fsl.utils.notifier    as notifier
 import fsl.utils.memoize     as memoize
 import fsl.utils.path        as fslpath
diff --git a/fsl/data/mesh.py b/fsl/data/mesh.py
index f3d1fb93bfdeaff3a0fb3afac2cd2dd9a0bb38cf..d512972d11904703d8db062815e2cb4b94dc4bd4 100644
--- a/fsl/data/mesh.py
+++ b/fsl/data/mesh.py
@@ -33,9 +33,9 @@ import collections
 import os.path as op
 import numpy   as np
 
-import fsl.utils.meta      as meta
-import fsl.utils.notifier  as notifier
-import fsl.utils.transform as transform
+import fsl.utils.meta     as meta
+import fsl.utils.notifier as notifier
+import fsl.transform      as transform
 
 
 log = logging.getLogger(__name__)
diff --git a/fsl/data/mghimage.py b/fsl/data/mghimage.py
index 6c36340d923c8df61ddc8a5ee0ca2d308bde54dc..9693d21fab84f09e00163736fc4344600d834dc4 100644
--- a/fsl/data/mghimage.py
+++ b/fsl/data/mghimage.py
@@ -14,9 +14,9 @@ import os.path as op
 import            six
 import nibabel as nib
 
-import fsl.utils.path      as fslpath
-import fsl.utils.transform as transform
-import fsl.data.image      as fslimage
+import fsl.utils.path as fslpath
+import fsl.transform  as transform
+import fsl.data.image as fslimage
 
 
 ALLOWED_EXTENSIONS = ['.mgz', '.mgh']
diff --git a/fsl/scripts/fsl_convert_x5.py b/fsl/scripts/fsl_convert_x5.py
index 248f6e260749a0099081692e599caf23f0e44b07..b56e1dc96c8b4b3d6eaee44c0024b7bd1e6f7bea 100644
--- a/fsl/scripts/fsl_convert_x5.py
+++ b/fsl/scripts/fsl_convert_x5.py
@@ -12,8 +12,8 @@ import            shutil
 import            logging
 import            argparse
 
-import fsl.data.image      as fslimage
-import fsl.utils.transform as transform
+import fsl.data.image as fslimage
+import fsl.transform  as transform
 
 
 log = logging.getLogger(__name__)