From e01f95f82f13e7e77219fc2982225d0bf65a5ba9 Mon Sep 17 00:00:00 2001
From: Michiel Cottaar <MichielCottaar@protonmail.com>
Date: Wed, 10 Jun 2020 10:44:16 +0100
Subject: [PATCH] REF: remove wait
qstat should not be called regularly
---
fsl/utils/fslsub.py | 16 ----------------
1 file changed, 16 deletions(-)
diff --git a/fsl/utils/fslsub.py b/fsl/utils/fslsub.py
index 27b455f40..7e4976235 100644
--- a/fsl/utils/fslsub.py
+++ b/fsl/utils/fslsub.py
@@ -378,22 +378,6 @@ def output(job_id, logdir='.', command=None, name=None):
return stdout, stderr
-def wait(job_ids):
- """Wait for one or more jobs to finish
-
- :arg job_ids: string or tuple of strings with jobs that should finish
- before continuing
- """
- start_time = time.time()
- for job_id in _flatten_job_ids(job_ids).split(','):
- log.debug('Waiting for job {}'.format(job_id))
- while len(info(job_id)) > 0:
- wait_time = min(max(1, (time.time() - start_time) / 3.), 20)
- time.sleep(wait_time)
- log.debug('Job {} finished, continuing to next'.format(job_id))
- log.debug('All jobs have finished')
-
-
def _flatten_job_ids(job_ids):
"""
Returns a potentially nested sequence of job ids as a single comma-separated string
--
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