FSLeyes, the FSL image viewer.

FSLeyes, the FSL image viewer.

This project will aim to address one of the big challenges in imaging-neuroscience: that of how a brain’s functional connectivity, represented by resting-state maps, can be predicted from structural connectivity information obtained from dw-MRI.

The FMRIB UKBioBank Normalisation, Parsing And Cleaning Kit

My personal utilities library

The main user interface for FSL built with wxPython

The FMRIB UKBiobank Normalisation, Processing And Cleaning Kit

Fits continuous white matter fiber distributions

The FSL Python Library

use enantiomorphic technique to fill pathological sections of a 3d brain image. Requires a binary mask with ones in areas of damage.

repo of files sorted by each meeting

Code for inferring PRObabilistic FUnctional MOdes. See DOI: 10.1016/j.neuroimage.2015.01.013 and DOI: 10.1101/544817.

Triplanar U-Net Ensemble model for white matter hyperintensities segmentation

strokeseg is a python package + command line program to identify stroke in clinical brain images.

The FSL Python Library

Talks, practicals, and other materials for the 2020 WIN PyTreat