Update bb_basic_QC.py (removing ['path'] string.

bb_pipeline_tools/bb_basic_QC.py

@@ -97,20 +97,20 @@ def bb_basic_QC(subject, fileConfig, basic_QC_file):
     fd_fileName = "logs/file_descriptor.json"
 
     for fileN in fileConfig:
-        if not isinstance(fileConfig[fileN]['path'], list):
+        if not isinstance(fileConfig[fileN], list):
 
-            if bb_path.isImage(fileConfig[fileN]['path']):
-                fils=bb_path.removeImageExt(fileConfig[fileN]['path'])   
+            if bb_path.isImage(fileConfig[fileN]):
+                fils=bb_path.removeImageExt(fileConfig[fileN])   
       
                 if os.path.isfile(fils+"_orig.nii.gz"):
                     fileList=[fils+"_orig.nii.gz"]
                 else:
-                    fileList=[fileConfig[fileN]['path']]
+                    fileList=[fileConfig[fileN]]
 
             else:
-                fileList=[fileConfig[fileN]['path']]
+                fileList=[fileConfig[fileN]]
         else:
-            fileList=fileConfig[fileN]['path']
+            fileList=fileConfig[fileN]
 
         for fileName in fileList:
             if os.path.isfile(fileName):