diff --git a/fslanimate b/fslanimate index 9e6f56848d34265e6fa1ea405eb81222f9da47b6..e20827e7392e4eb92864450851ee3df228d996b4 100755 --- a/fslanimate +++ b/fslanimate @@ -54,7 +54,7 @@ cd $tmpdir $FSLDIR/bin/avwsplit $im for fnm in `$FSLDIR/bin/imglob vol*` ; do - num=`echo $fnm | $FSLDIR/bin/remove_ext | sed 's/vol//'`; export num; + num=`$FSLDIR/bin/remove_ext $fnm | sed 's/vol//'`; export num; echo $num; $FSLDIR/bin/slicer $fnm -s 2 -a ${iout}_$num.pgm ${FSLCONVERT} ${iout}_$num.pgm ${iout}_$num.gif