From 678ba29bb15f0f4eed7f1ecab12a6d306961e7bb Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 10 Mar 2023 10:41:47 +0000
Subject: [PATCH] CI: Run unit tests via gitlab CI
---
.ci/unit_tests.sh | 16 ++++++++++++++++
.gitlab-ci.yml | 20 ++++++++++++++++++++
2 files changed, 36 insertions(+)
create mode 100644 .ci/unit_tests.sh
create mode 100644 .gitlab-ci.yml
diff --git a/.ci/unit_tests.sh b/.ci/unit_tests.sh
new file mode 100644
index 0000000..384b352
--- /dev/null
+++ b/.ci/unit_tests.sh
@@ -0,0 +1,16 @@
+#!/usr/bin/env bash
+
+conda create \
+ -c https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public/ \
+ -c conda-forge \
+ -p ./test.env \
+ "python=${PYTHON_VERSION}" \
+ pytest \
+ coverage \
+ pytest-cov
+
+source activate ./test.env
+
+pip install --no-deps -e .
+
+pytest
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
new file mode 100644
index 0000000..7df784e
--- /dev/null
+++ b/.gitlab-ci.yml
@@ -0,0 +1,20 @@
+stages:
+ - test
+
+
+.test: &test_template
+ stage: test
+ image: continuumio/miniconda3
+ tags:
+ - docker
+ except:
+ - tags
+ - merge_requests
+ script:
+ - bash ./.ci/unit_tests.sh
+
+
+test:3.11:
+ variables:
+ PYTHON_VERSION : "3.11"
+ <<: *test_template
--
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