Commit 707b0b74 authored by Paul McCarthy's avatar Paul McCarthy 🚵
Browse files

DOC: small fixes/adjustments

parent 84cecb04
...@@ -37,7 +37,7 @@ https://git.fmrib.ox.ac.uk. ...@@ -37,7 +37,7 @@ https://git.fmrib.ox.ac.uk.
fsl/conda/manifest> repository fsl/conda/manifest> repository
- fsl/conda/installer>: Home of the `fslinstaller.py` script, for - fsl/conda/installer>: Home of the `fslinstaller.py` script, for
installing FSL installing FSL
- fsl/conda/fsl-ci-rules>: CI rules for automated building and publishing - fsl/conda/fsl-ci-rules>: CI rules for automated building and publishing
of FSL conda packages of FSL conda packages
- `fsl/<project>`: Source code repository for FSL project `<project>` - `fsl/<project>`: Source code repository for FSL project `<project>`
(e.g. fsl/avwutils>) (e.g. fsl/avwutils>)
...@@ -90,7 +90,8 @@ new release are automatically generated from information stored in the ...@@ -90,7 +90,8 @@ new release are automatically generated from information stored in the
The `manifest.json` and `environment.yml` files for public and internal The `manifest.json` and `environment.yml` files for public and internal
release are currently published to http://18.133.213.73/releases/. release are currently published to
https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/releases/.
## The `fslinstaller.py` script ## The `fslinstaller.py` script
......
...@@ -6,9 +6,9 @@ projects - it does not describe the release process for full/official FSL ...@@ -6,9 +6,9 @@ projects - it does not describe the release process for full/official FSL
installations. installations.
All FSL projects are released and published as conda packages, either in the All FSL projects and dependencies are released and published as conda
internal FMRIB conda channel, or on https://anaconda.org, via packages, either in the internally managed FMRIB conda channel, or on
[`conda-forge`](https://conda-forge.org/). https://anaconda.org, via [`conda-forge`](https://conda-forge.org/).
## Project and recipe repositories ## Project and recipe repositories
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...@@ -3,7 +3,7 @@ ...@@ -3,7 +3,7 @@
*This document is written under the assumption that you have FSL 6.0.6 or *This document is written under the assumption that you have FSL 6.0.6 or
newer, installed via the fslinstaller script. These instructions will not work newer, installed via the fslinstaller script. These instructions will not work
for manually managed FSL installations.* for older versions of FSL, nor for manually managed FSL installations.*
This document describes how to set up a local development environment for This document describes how to set up a local development environment for
...@@ -45,7 +45,7 @@ git clone https://git.fmrib.ox.ac.uk/fsl/randomise.git ...@@ -45,7 +45,7 @@ git clone https://git.fmrib.ox.ac.uk/fsl/randomise.git
cd randomise cd randomise
# Or work with the version you have installed # Or work with the version you have installed
cd $FSLDIR/src/randomise/ cd $FSLDIR/src/fsl-randomise/
# compile # compile
make make
......
...@@ -11,6 +11,11 @@ all FSL projects are installed directly into the base miniconda environment ...@@ -11,6 +11,11 @@ all FSL projects are installed directly into the base miniconda environment
at `$FSLDIR`. at `$FSLDIR`.
> An FSL installation may be baed on
> [miniforge](https://github.com/conda-forge/miniforge), which is a variant of
> miniconda tailored specifically for conda-forge.
An official (`fslinstaller`-installed) FSL installation can be distinguished An official (`fslinstaller`-installed) FSL installation can be distinguished
from a manually installed/managed FSL installation by the presence of a file from a manually installed/managed FSL installation by the presence of a file
called `$FSLDIR/etc/fslversion`. This file is created by the `fslinstaller.py` called `$FSLDIR/etc/fslversion`. This file is created by the `fslinstaller.py`
......
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