Commit ba19d25a authored by Paul McCarthy's avatar Paul McCarthy 🚵
Browse files

DOC: fix ref

parent 37ef5b4c
......@@ -22,7 +22,7 @@ Because `$FSLDIR` is a conda environment into which all FSL projects and their d
To work around this problem, and to isolate all of the FSL executables from the other executables installed into the same environment, the conda packages for all FSL projects use [`post-link.sh` and `pre-unlink.sh`](https://docs.conda.io/projects/conda-build/en/latest/resources/link-scripts.html) scripts to create _wrapper scripts_ within `$FSLDIR/share/fsl/bin/`<sup>*</sup>. These wrapper scripts are created by the [`$FSLDIR/share/fsl/sbin/createFSLWrapper`](https://git.fmrib.ox.ac.uk/fsl/base/-/blob/master/share/fsl/sbin/createFSLWrapper) script, which is installed as part of the [`fsl-base`](https://git.fmrib.ox.ac.uk/fsl/base/) package.
> <sup>*</sup> More details on FSL project conda recipes are outlined in [`fsl_conda_recipes.md`](fsl_conda_recipes.md).
> <sup>*</sup> More details on FSL project conda recipes are outlined in [`creating_fsl_conda_recipes.md`](creating_fsl_conda_recipes.md).
Users can then add the `$FSLDIR/share/fsl/bin/` directory to their `$PATH`, with the effect that only FSL executables will be made available in their environment. This mechanism also has the advantage that all existing FSL and third-party scripts which refer to `$FSLDIR/bin/<command>` will continue to work without modification.
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