diff --git a/bedpostx b/bedpostx index ece89d235e95783df9e48c84b78b4d8131665134..04b7498a77086fda578101c2c6fc8e0f3bb755ba 100755 --- a/bedpostx +++ b/bedpostx @@ -170,7 +170,7 @@ slice=0 while [ $slice -lt $nslices ] do slicezp=`$FSLDIR/bin/zeropad $slice 4` - if [ -f ${subjdir}.bedpostX/diff_slices/data_slice_$slicezp/dyads2.nii.gz ];then + if [ `$FSLDIR/bin/imtest ${subjdir}.bedpostX/diff_slices/data_slice_$slicezp/dyads1` -eq 1 ];then echo "slice $slice has already been processed" else echo "${FSLDIR}/bin/bedpostx_single_slice.sh $subjdir $nfibres $fudge $burnin $njumps $sampleevery $slice" \