From 171dcd84cc6c3d8e219043b3cd415b8c2e135f6c Mon Sep 17 00:00:00 2001
From: Matthew Webster <mwebster@fmrib.ox.ac.uk>
Date: Fri, 6 Jul 2007 13:01:27 +0000
Subject: [PATCH] update to batching

---
 fdtx.tcl | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/fdtx.tcl b/fdtx.tcl
index b757f84..37e5ce9 100644
--- a/fdtx.tcl
+++ b/fdtx.tcl
@@ -765,7 +765,7 @@ proc fdt:apply { w dialog } {
                     puts $script "cd $probtrack(output)"
                     puts $script "$FSLDIR/bin/probtrackx $flags"
                     if { $probtrack(classify_yn) == 1 } {
-			puts $script "$FSLDIR/bin/find_the_biggest ${logdir}/seeds_to_* biggest >> ${logdir}/fdt_seed_classification.txt"
+			puts $script "$FSLDIR/bin/find_the_biggest seeds_to_* biggest >> fdt_seed_classification.txt"
 		    }
                     if { $probtrack(mode) == "simple" } {
                     puts $script "rm ${filebase}_coordinates.txt"
-- 
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