From 2bc53494189a04ab6fa2c8edc918c37a677f07b5 Mon Sep 17 00:00:00 2001
From: Saad Jbabdi <saad@fmrib.ox.ac.uk>
Date: Sat, 18 Jul 2009 10:15:48 +0000
Subject: [PATCH] outputseedtotargetastext in simple mode
---
streamlines.cc | 6 ++++++
1 file changed, 6 insertions(+)
diff --git a/streamlines.cc b/streamlines.cc
index aae463d..3709304 100644
--- a/streamlines.cc
+++ b/streamlines.cc
@@ -466,6 +466,12 @@ namespace TRACT{
//cout<<"numseeds="<<numseeds<<endl;
}
}
+ if(opts.mode.value()=="simple"){
+ Matrix seeds = read_ascii_matrix(opts.seedfile.value());
+ if(seeds.Ncols()!=3 && seeds.Nrows()==3)
+ seeds=seeds.t();
+ numseeds = seeds.Nrows();
+ }
m_SeedCountMat.ReSize(numseeds,m_targetmasknames.size());
m_SeedCountMat=0;
m_SeedRow=1;
--
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