From 420eb090a13b423914c31cced9e5228f15d7b830 Mon Sep 17 00:00:00 2001
From: Stamatios Sotiropoulos <stam@fmrib.ox.ac.uk>
Date: Fri, 21 Jan 2011 11:31:58 +0000
Subject: [PATCH] Added pseudo-constrained non-linear optimization option
---
xfibresoptions.h | 10 +++++++---
1 file changed, 7 insertions(+), 3 deletions(-)
diff --git a/xfibresoptions.h b/xfibresoptions.h
index 9a1e71e..9885ab2 100644
--- a/xfibresoptions.h
+++ b/xfibresoptions.h
@@ -48,9 +48,10 @@ class xfibresOptions {
Option<bool> all_ard;
Option<bool> localinit;
Option<bool> nonlin;
- Option<bool> rician;
- Option<bool> f0;
- Option<bool> ardf0;
+ Option<bool> cnonlin;
+ FmribOption<bool> rician;
+ FmribOption<bool> f0;
+ FmribOption<bool> ardf0;
void parse_command_line(int argc, char** argv, Log& logger);
@@ -129,6 +130,8 @@ class xfibresOptions {
false,no_argument),
nonlin(string("--nonlinear"),false,string("Initialise with nonlinear fitting"),
false,no_argument),
+ cnonlin(string("--cnonlinear"),false,string("Initialise with constrained nonlinear fitting"),
+ false,no_argument),
rician(string("--rician"),false,string("Use Rician noise modelling"),false,no_argument),
f0(string("--f0"),false,string("Add to the model an unattenuated signal compartment"),false,no_argument),
ardf0(string("--ardf0"),false,string("Use ard on f0"),false,no_argument),
@@ -156,6 +159,7 @@ class xfibresOptions {
options.add(all_ard);
options.add(localinit);
options.add(nonlin);
+ options.add(cnonlin);
options.add(rician);
options.add(f0);
options.add(ardf0);
--
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