diff --git a/Makefile b/Makefile index 47a69d707004173abd1189cdc23b5f0a240eb17f..5cac529c4e0c9d7e498d00d4d4d703994c7061ed 100644 --- a/Makefile +++ b/Makefile @@ -16,6 +16,7 @@ MED=medianfilter ROM=reord_OM SAUS=sausages XFIBRES=xfibres +XFIBRES2=xfibres_2 RV=replacevols MDV=make_dyadic_vectors FMO=fdt_matrix_ops @@ -34,6 +35,7 @@ MEDOBJS=medianfilter.o ROMOBJS=reord_OM.o SAUSOBJS=sausages.o XFIBOBJS=xfibres.o xfibresoptions.o +XFIBOBJS2=xfibres_2.o xfibresoptions.o RVOBJS=replacevols.o MDVOBJS=make_dyadic_vectors.o FMOOBJS=fdt_matrix_ops.o @@ -46,7 +48,7 @@ PVMFITOBJS=pvmfit.o pvmfitOptions.o SGEBEDPOST = bedpost SGEBEDPOSTX = bedpostx bedpostx_postproc.sh bedpostx_preproc.sh bedpostx_single_slice.sh bedpostx_datacheck -SCRIPTS = eddy_correct zeropad maskdyads probtrack ${SGEBEDPOST} ${SGEBEDPOSTX} +SCRIPTS = eddy_correct zeropad maskdyads probtrack rotate_bvecs ${SGEBEDPOST} ${SGEBEDPOSTX} FSCRIPTS = correct_and_average ocmr_preproc XFILES = dtifit ccops find_the_biggest medianfilter make_dyadic_vectors proj_thresh vecreg xfibres probtrackx @@ -88,6 +90,9 @@ ${SAUS}: ${SAUSOBJS} ${XFIBRES}: ${XFIBOBJS} ${CXX} ${CXXFLAGS} ${LDFLAGS} -o $@ ${XFIBOBJS} ${DLIBS} +${XFIBRES2}: ${XFIBOBJS2} + ${CXX} ${CXXFLAGS} ${LDFLAGS} -o $@ ${XFIBOBJS2} ${DLIBS} + ${RV}: ${RVOBJS} ${CXX} ${CXXFLAGS} ${LDFLAGS} -o $@ ${RVOBJS} ${DLIBS}