diff --git a/fdt.tcl b/fdt.tcl
index 29400c4b7739527421dbc6fab89d3d3564a13231..6a752dbfc6478eaa6ae29d8e5d490c7a01c061ff 100644
--- a/fdt.tcl
+++ b/fdt.tcl
@@ -1038,7 +1038,7 @@ proc fdt:apply { w dialog } {
 		    fdt_monitor $w "${FSLDIR}/bin/convert_xfm -omat $stand2diff -inverse $diff2stand"
 		    if { $registration(nonlin_yn) } {
 			fdt_monitor $w "${FSLDIR}/bin/fnirt --in=$registration(nonlin_image) --aff=$str2stand --cout=$str2stand_warp --config=T1_2_MNI152_2mm"
-			fdt_monitor $w "${FSLDIR}/bin/invwarp -w $str2stand_warp -o $standard2str_warp -r $registration(struct_image)"
+			fdt_monitor $w "${FSLDIR}/bin/invwarp -w $str2stand_warp -o $stand2str_warp -r $registration(struct_image)"
 			fdt_monitor $w "${FSLDIR}/bin/convertwarp -o $diff2stand_warp -r ${FSLDIR}/data/standard/MNI152_T1_2mm -m $diff2str -w $str2stand_warp"
 			fdt_monitor $w "${FSLDIR}/bin/convertwarp -o $stand2diff_warp -r ${diff}_mask -w $stand2str_warp --postmat=$str2diff"
 		    }