diff --git a/bedpostx_datacheck b/bedpostx_datacheck index 721a214692f8f8d8c4a01f1def38b95cf75afdee..49d2842ba56d7c48200fd13a9f38c8f5d43c639f 100755 --- a/bedpostx_datacheck +++ b/bedpostx_datacheck @@ -24,7 +24,7 @@ for bv in ${DIR}/bvals ${DIR}/bvecs;do cat $bv|wc -w done -if [ `${FSLDIR}/bin/imtest ${DIR}/data` -eq 1 -a `${FSLDIR}/bin/imtest ${DIR}/nodif_brain_mask` -eq 1 ];then +if [ `${FSLDIR}/bin/imtest ${DIR}/data` -eq 1 ] && [ `${FSLDIR}/bin/imtest ${DIR}/nodif_brain_mask` -eq 1 ];then dx=`${FSLDIR}/bin/fslval ${DIR}/data dim1` dy=`${FSLDIR}/bin/fslval ${DIR}/data dim2` @@ -36,7 +36,7 @@ if [ `${FSLDIR}/bin/imtest ${DIR}/data` -eq 1 -a `${FSLDIR}/bin/imtest ${DIR}/no nbmz=`${FSLDIR}/bin/fslval ${DIR}/nodif_brain_mask dim3` - if [ $dx -ne $nbmx -o $dy -ne $nbmy -o $dz -ne $nbmz ];then + if [ $dx -ne $nbmx ] || [ $dy -ne $nbmy ] || [ $dz -ne $nbmz ];then echo "data dimensions do not match mask dimensions" fi