diff --git a/streamlines.cc b/streamlines.cc index 7982c2cca863128c1a49ea20d4c2c564382a8662..d6874f924c2f1e742df1e14e7c2b15c4368e34d2 100644 --- a/streamlines.cc +++ b/streamlines.cc @@ -221,8 +221,6 @@ namespace TRACT{ x=xst;y=yst;z=zst; m_part.change_xyz(x,y,z); - //m_part.set_dir(dir(1),dir(2),dir(3));//Set the start dir so that we track inwards from cortex - if(opts.meshfile.value()!=""){ m_part.set_dir(dir(1),dir(2),dir(3));//Set the start dir so that we track inwards from cortex } @@ -843,6 +841,7 @@ namespace TRACT{ } void Counter::save_pathdist(){ + m_prob.setDisplayMaximumMinimum(m_prob.max(),m_prob.min()); save_volume(m_prob,logger.appendDir("fdt_paths")); } @@ -850,6 +849,7 @@ namespace TRACT{ string thisout=opts.outfile.value(); make_basename(thisout); thisout+=add; + m_prob.setDisplayMaximumMinimum(m_prob.max(),m_prob.min()); save_volume(m_prob,thisout); } @@ -875,6 +875,7 @@ namespace TRACT{ imfill(seedcounts,m_seedcounts[m],m_seeds_mat2vol); + seedcounts.setDisplayMaximumMinimum(opts.nparticles.value(),0); save_volume(seedcounts,logger.appendDir("seeds_to_"+tmpname)); }