From b270c128c0403ec658fb35d8604237a2987e4319 Mon Sep 17 00:00:00 2001
From: Moises Fernandez <moisesf@fmrib.ox.ac.uk>
Date: Mon, 24 Jun 2013 10:59:12 +0000
Subject: [PATCH] Correct output name of dataHR after splitting it
---
rubix_preproc.sh | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/rubix_preproc.sh b/rubix_preproc.sh
index 26f5358..f797f7a 100644
--- a/rubix_preproc.sh
+++ b/rubix_preproc.sh
@@ -12,7 +12,7 @@ if [ ${filterflag} -eq 1 ]; then
cp ${subjdir}/bvecs $out_dir/bvecsLR
cp ${subjdir}/bvecs $out_dir/bvecsHR
cp ${subjdir}/bvals $out_dir/bvalsHR
- ${FSLDIR}/bin/fslslice $subjdir/data $out_dir/$dataHR
+ ${FSLDIR}/bin/fslslice $subjdir/data $out_dir/dataHR
HighRes=`fslval ${subjdir}/data pixdim1`
LowRes=`echo "${HighRes} * 2" | bc -l`
echo "Create Downsampled version of data at ${LowRes} mm isotropic"
--
GitLab