From d7cc7d57933136a0d510845b6eb7e2290b80ad4c Mon Sep 17 00:00:00 2001
From: Moises Fernandez <moisesf@fmrib.ox.ac.uk>
Date: Mon, 17 Dec 2012 11:37:36 +0000
Subject: [PATCH] add checking the set of the queues used in SGE
---
CUDA/bedpostx_multigpu_SGE | 10 ++++++++++
1 file changed, 10 insertions(+)
diff --git a/CUDA/bedpostx_multigpu_SGE b/CUDA/bedpostx_multigpu_SGE
index b6ae0ed..90b1244 100755
--- a/CUDA/bedpostx_multigpu_SGE
+++ b/CUDA/bedpostx_multigpu_SGE
@@ -10,6 +10,16 @@ if [ -z $PE_NAME ] ; then
exit 1
fi
+if [ -z $QUEUE_GPU ] ; then
+ echo "Please set QUEUE_GPU environment variable with a Queue Instance name used in SGE for process slices in GPUs"
+ exit 1
+fi
+
+if [ -z $QUEUE_GENERAL ] ; then
+ echo "Please set QUEUE_GENERAL environment variable with a Queue Instance name used in SGE for process the post processing stage in CPU"
+ exit 1
+fi
+
beforet=`date +%s`
if [ "x$SGE_ROOT" = "x" ] ; then
if [ -f /usr/local/share/sge/default/common/settings.sh ] ; then
--
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