diff --git a/fdt.tcl b/fdt.tcl index 88492ee19182330e8716279d743e431dbead0dc2..6a3e786560b313e4ea73daa4dcb148725938e858 100644 --- a/fdt.tcl +++ b/fdt.tcl @@ -927,7 +927,7 @@ proc fdt:apply { w dialog } { fdt_monitor $w "${FSLDIR}/bin/convert_xfm -omat $diff2stand -concat $str2stand $diff2str" fdt_monitor $w "${FSLDIR}/bin/convert_xfm -omat $stand2diff -inverse $diff2stand" if { $registration(nonlin_yn) } { - fdt_monitor $w "${FSLDIR}/bin/fnirt --in=$registration(nonlin_image) --aff=$str2strand --cout=$str2stand_warp --config=T1_2_MNI152_2mm" + fdt_monitor $w "${FSLDIR}/bin/fnirt --in=$registration(nonlin_image) --aff=$str2stand --cout=$str2stand_warp --config=T1_2_MNI152_2mm" fdt_monitor $w "${FSLDIR}/bin/invwarp -w $str2stand_warp -o standard2str_warp -r ${diff}_mask" fdt_monitor $w "${FSLDIR}/bin/convertwarp -o $diff2stand_warp -r ${FSLDIR}/data/standard/MNI152_T1_2mm -m $diff2str -w $str2stand_warp" fdt_monitor $w "${FSLDIR}/bin/convertwarp -o $stand2diff_warp -r ${diff}_mask -w $stand2str_warp --postmat=$str2diff"