FSLeyes logging is being extra verbose about "allowedFileType"
The issue (terminal output of verbose messages):
There is no error, and FSLeyes works as expected. However, these logging messages are new to me... and might alarm some users
2021-11-18 11:31:19.179 python[8299:524400] nii.gz is not a valid allowedFileType because it cannot be converted to a UTType
2021-11-18 11:31:19.179 python[8299:524400] img.gz is not a valid allowedFileType because it cannot be converted to a UTType
2021-11-18 11:31:19.179 python[8299:524400] hdr.gz is not a valid allowedFileType because it cannot be converted to a UTType
2021-11-18 11:31:19.179 python[8299:524400] surf.gii is not a valid allowedFileType because it cannot be converted to a UTTypeFSLeyes version:
➜ ~ fsleyes --version
fsleyes/FSLeyes version 1.3.0FSL version:
6.0.5.20211115.e6755ce4.externalsystem info:
System Software Overview:
System Version: macOS 12.0.1 (21A559)
Kernel Version: Darwin 21.1.0
Boot Volume: Macintosh HD
Boot Mode: Normal
Computer Name: mbp2021
User Name: Taylor Hanayik (taylor)
Secure Virtual Memory: Enabled
System Integrity Protection: Enabled
Time since boot: 2 days 20:15output of conda list:
conda list
# packages in environment at /Users/taylor/fsl-conda:
#
# Name Version Build Channel
alabaster 0.7.12 py_0 conda-forge
aom 3.2.0 he49afe7_2 conda-forge
appdirs 1.4.4 pyh9f0ad1d_0 conda-forge
appnope 0.1.2 py39h6e9494a_2 conda-forge
apptools 5.1.0 pyh44b312d_0 conda-forge
argon2-cffi 21.1.0 py39h89e85a6_2 conda-forge
async_generator 1.10 py_0 conda-forge
atk-1.0 2.36.0 he69c4ee_4 conda-forge
attrdict 2.0.1 py_0 conda-forge
attrs 21.2.0 pyhd8ed1ab_0 conda-forge
babel 2.9.1 pyh44b312d_0 conda-forge
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 py_2 conda-forge
backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0 conda-forge
backports.lzma 0.0.14 py39hd5dad98_3 conda-forge
bash 5.0.018 h8a0c380_0 conda-forge
bash_kernel 0.7.2 py39h6e9494a_3 conda-forge
beautifulsoup4 4.10.0 pyha770c72_0 conda-forge
bleach 4.1.0 pyhd8ed1ab_0 conda-forge
blosc 1.21.0 he49afe7_0 conda-forge
bokeh 2.4.1 py39h6e9494a_2 conda-forge
boost-cpp 1.74.0 hff03dee_4 conda-forge
brotli 1.0.9 h0d85af4_6 conda-forge
brotli-bin 1.0.9 h0d85af4_6 conda-forge
brotlipy 0.7.0 py39h89e85a6_1001 conda-forge
brukerapi 0.1.4.0 pyhd8ed1ab_0 conda-forge
brunsli 0.1 h046ec9c_0 conda-forge
bzip2 1.0.8 h0d85af4_4 conda-forge
c-ares 1.18.1 h0d85af4_0 conda-forge
c-blosc2 2.0.4 ha1a4663_1 conda-forge
c-compiler 1.3.0 h0d85af4_0 conda-forge
ca-certificates 2021.10.8 h033912b_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 4.2.4 pyhd8ed1ab_0 conda-forge
cairo 1.16.0 he43a7df_1008 conda-forge
cctools 949.0.1 hd9211c8_21 conda-forge
cctools_osx-64 949.0.1 h6407bdd_21 conda-forge
certifi 2021.10.8 py39h6e9494a_1 conda-forge
cffi 1.14.6 py39hb71fe58_0 conda-forge
cfitsio 4.0.0 hb20e66c_0 conda-forge
chardet 4.0.0 py39h6e9494a_1 conda-forge
charls 2.2.0 h046ec9c_0 conda-forge
charset-normalizer 2.0.0 pyhd8ed1ab_0 conda-forge
ciftilib 1.5.3 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
clang 11.1.0 h694c41f_1 conda-forge
clang-11 11.1.0 default_he082bbe_1 conda-forge
clang_osx-64 11.1.0 hb91bd55_4 conda-forge
clangxx 11.1.0 default_he082bbe_1 conda-forge
clangxx_osx-64 11.1.0 h7e1b574_4 conda-forge
click 8.0.3 py39h6e9494a_1 conda-forge
cloudpickle 2.0.0 pyhd8ed1ab_0 conda-forge
colorama 0.4.4 pyh9f0ad1d_0 conda-forge
compiler-rt 11.1.0 h654b07c_0 conda-forge
compiler-rt_osx-64 11.1.0 h8c5fa43_0 conda-forge
conda 4.10.3 py39h6e9494a_3 conda-forge
conda-package-handling 1.7.3 py39h89e85a6_0 conda-forge
configobj 5.0.6 py_0 conda-forge
cryptography 3.4.8 py39ha2c9959_0 conda-forge
curl 7.80.0 hf45b732_0 conda-forge
cxx-compiler 1.3.0 h940c156_0 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
cytoolz 0.11.2 py39h89e85a6_1 conda-forge
dask 2021.11.1 pyhd8ed1ab_0 conda-forge
dask-core 2021.11.1 pyhd8ed1ab_0 conda-forge
dbus 1.13.6 ha13b53f_2 conda-forge
dcm2niix 1.0.20211006 h940c156_0 conda-forge
debugpy 1.5.1 py39h9fcab8e_0 conda-forge
decorator 5.1.0 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
dill 0.3.4 pyhd8ed1ab_0 conda-forge
distributed 2021.11.1 py39h6e9494a_0 conda-forge
docutils 0.17.1 py39h6e9494a_0 conda-forge
double-conversion 3.1.5 he49afe7_2 conda-forge
eigen 3.4.0 h940c156_0 conda-forge
entrypoints 0.3 pyhd8ed1ab_1003 conda-forge
envisage 6.0.1 pyhd8ed1ab_0 conda-forge
expat 2.4.1 he49afe7_0 conda-forge
ffmpeg 4.4.1 h79e7b16_0 conda-forge
file-tree 0.3.6 pyhd8ed1ab_0 conda-forge
file-tree-fsl 0.2.0 pyhd8ed1ab_0 conda-forge
fmrib-unpack 2.8.0 pyhd8ed1ab_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.13.1 h10f422b_1005 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
freetype 2.10.4 h4cff582_1 conda-forge
fribidi 1.0.10 hbcb3906_0 conda-forge
frozendict 2.0.3 pyhd8ed1ab_0 conda-forge
fsl-add_module 0.3.2 py_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-armawrap 0.6.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-asl_mfree v1.0.2 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-avwutils 2101.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-base 2111.1 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-basil v4.0.4 1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-basisfield 1910.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-baycest 2012.0 1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-bet2 2103.0 ha5a8b8e_3 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-bianca 2106.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-bint 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-cluster 2004.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-cprob 2006.0 ha5a8b8e_3 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-cudimot 2006.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_atlases 2103.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_atlases_xtract 1.1.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_first_models_317_bin 2006.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_first_models_336_bin 2006.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_linearmni 1.0.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_possum 2106.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-data_standard 2006.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-deface 1.2.0 1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-discreteopt 2008.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-eddy 2106.1 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-eddy_qc v1.0.3 py_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_core v4.0.10 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_asl v2.0.7 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_cest v2.1.6 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_dce v2.1.5 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_dsc v2.0.5 ha5a8b8e_2 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_dualecho v2.0.4 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_dwi v2.0.3 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_pet v1.0.1 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_qbold v1.0.2 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fabber_models_t1 v2.0.2 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fast4 2012.0 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fastpdlib 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fdt 2103.0 ha5a8b8e_3 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-feat5 2104.0 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-film 2007.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-filmbabe 2012.0 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-first 2006.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-first_lib 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-flameo 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-flirt 2108.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fnirt 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-fugue 2010.0 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-get_standard 0.1.0 py_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-giftiio 2110.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-gps 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-lesions 1909.1 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-libgdc 2006.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-libmeshutils 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-libvis 1909.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-mcflirt 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-melodic 2012.0 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-meshclass 2102.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-misc_c 2106.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-misc_scripts 2004.0 1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-misc_tcl 2109.0 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-miscmaths 2010.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-miscvis 2007.0 4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-mist 2010.0 h924c13f_2 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-mm 1909.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-mrs 1.1.8 py_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-msm 2008.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-msmreglib 2008.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-mvdisc 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-newimage 2104.1 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-newnifti 3.0.7 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-newran 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-possum 2111.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-pyfeeds 0.9.9 py_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-pyfeeds-tests 2110.1 0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-qboot 2010.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-randomise 2101.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-shapemodel 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-susan 2012.0 ha5a8b8e_4 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-tirl v2.2.1 py39hde87aaf_2 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-topup 1911.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-utils 2007.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-vtkio 2012.0 ha5a8b8e_1 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
fsl-warpfns 2106.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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fsl-znzlib 2110.0 ha5a8b8e_0 https://fsl.fmrib.ox.ac.uk/fsldownloads/fslconda/public
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