diff --git a/MANIFEST.in b/MANIFEST.in
index 60d1bd0ca252651532d78f1235807dcf05ab00a2..0b7cafe9cf7623f04a15db808a3808aa162ebaa8 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -1,5 +1,7 @@
include AUTHOR
include CHANGELOG.rst
include COPYRIGHT
-recursive-include doc *
-recursive-include tests *
+include LICENSE
+include README.rst
+recursive-include doc *
+recursive-include fsl/tests *
diff --git a/tests/__init__.py b/fsl/tests/__init__.py
similarity index 100%
rename from tests/__init__.py
rename to fsl/tests/__init__.py
diff --git a/tests/conftest.py b/fsl/tests/conftest.py
similarity index 100%
rename from tests/conftest.py
rename to fsl/tests/conftest.py
diff --git a/tests/test_assertions.py b/fsl/tests/test_assertions.py
similarity index 100%
rename from tests/test_assertions.py
rename to fsl/tests/test_assertions.py
diff --git a/tests/test_atlases.py b/fsl/tests/test_atlases.py
similarity index 99%
rename from tests/test_atlases.py
rename to fsl/tests/test_atlases.py
index ccc73b27841c21833897c3ba4c819ed32368b0b4..623858c219314896315f9ecf96b4c227378175ba 100644
--- a/tests/test_atlases.py
+++ b/fsl/tests/test_atlases.py
@@ -17,7 +17,7 @@ import numpy as np
from unittest import mock
import pytest
-import tests
+import fsl.tests as tests
import fsl.utils.image.resample as resample
import fsl.data.atlases as atlases
import fsl.data.image as fslimage
diff --git a/tests/test_atlases_query.py b/fsl/tests/test_atlases_query.py
similarity index 100%
rename from tests/test_atlases_query.py
rename to fsl/tests/test_atlases_query.py
diff --git a/tests/test_bids.py b/fsl/tests/test_bids.py
similarity index 100%
rename from tests/test_bids.py
rename to fsl/tests/test_bids.py
diff --git a/tests/test_bitmap.py b/fsl/tests/test_bitmap.py
similarity index 100%
rename from tests/test_bitmap.py
rename to fsl/tests/test_bitmap.py
diff --git a/tests/test_cache.py b/fsl/tests/test_cache.py
similarity index 100%
rename from tests/test_cache.py
rename to fsl/tests/test_cache.py
diff --git a/tests/test_cifti.py b/fsl/tests/test_cifti.py
similarity index 99%
rename from tests/test_cifti.py
rename to fsl/tests/test_cifti.py
index d0b758f2bd1ff6baec7c9eece4023795583e5340..2e496f2290faebb882e3c82255461d04c0224b15 100644
--- a/tests/test_cifti.py
+++ b/fsl/tests/test_cifti.py
@@ -3,7 +3,7 @@ import os.path as op
import numpy as np
import nibabel as nib
from numpy import testing
-import tests
+import fsl.tests as tests
from nibabel.cifti2 import cifti2_axes
diff --git a/tests/test_deprecated.py b/fsl/tests/test_deprecated.py
similarity index 100%
rename from tests/test_deprecated.py
rename to fsl/tests/test_deprecated.py
diff --git a/tests/test_dicom.py b/fsl/tests/test_dicom.py
similarity index 100%
rename from tests/test_dicom.py
rename to fsl/tests/test_dicom.py
diff --git a/tests/test_dtifit.py b/fsl/tests/test_dtifit.py
similarity index 99%
rename from tests/test_dtifit.py
rename to fsl/tests/test_dtifit.py
index 00fc058ffca6dabc4f70a0e15459748681d0d539..cb5026940e013b80a3dd016559145f86af3fd015 100644
--- a/tests/test_dtifit.py
+++ b/fsl/tests/test_dtifit.py
@@ -10,7 +10,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.dtifit as dtifit
import fsl.data.image as fslimage
diff --git a/tests/test_ensure.py b/fsl/tests/test_ensure.py
similarity index 100%
rename from tests/test_ensure.py
rename to fsl/tests/test_ensure.py
diff --git a/tests/test_featanalysis.py b/fsl/tests/test_featanalysis.py
similarity index 99%
rename from tests/test_featanalysis.py
rename to fsl/tests/test_featanalysis.py
index 96445cdbd38d1bf983bfa6c33cb89c7399e12cb1..6f07109ed18b5c20f6cd810988a20deb97f26f87 100644
--- a/tests/test_featanalysis.py
+++ b/fsl/tests/test_featanalysis.py
@@ -17,7 +17,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.featanalysis as featanalysis
import fsl.data.featdesign as featdesign
import fsl.data.image as fslimage
diff --git a/tests/test_featdesign.py b/fsl/tests/test_featdesign.py
similarity index 99%
rename from tests/test_featdesign.py
rename to fsl/tests/test_featdesign.py
index 5c5d1a7e3433cb2c62bcb1c13b0e4bf061aa6028..e8ffdecec98d373b40b03b9fa1dfa9983a5444c1 100644
--- a/tests/test_featdesign.py
+++ b/fsl/tests/test_featdesign.py
@@ -108,7 +108,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
from fsl.utils.tempdir import tempdir
import fsl.data.featdesign as featdesign
import fsl.data.featanalysis as featanalysis
diff --git a/tests/test_featimage.py b/fsl/tests/test_featimage.py
similarity index 99%
rename from tests/test_featimage.py
rename to fsl/tests/test_featimage.py
index fb33c6e4ddb13b43dbc4d1883faddf227489b305..370e797366597d44afaf39414e81cdf7f185bd5e 100644
--- a/tests/test_featimage.py
+++ b/fsl/tests/test_featimage.py
@@ -16,7 +16,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.featimage as featimage
import fsl.data.featdesign as featdesign
import fsl.data.featanalysis as featanalysis
@@ -138,7 +138,7 @@ def test_FEATImage_imageAccessors():
shape = TEST_ANALYSES[featdir]['shape']
xform = TEST_ANALYSES[featdir]['xform']
-
+
with tests.testdir() as testdir:
if 'realdata' not in featdir:
diff --git a/tests/test_filetree/__init__.py b/fsl/tests/test_filetree/__init__.py
similarity index 100%
rename from tests/test_filetree/__init__.py
rename to fsl/tests/test_filetree/__init__.py
diff --git a/tests/test_filetree/custom.tree b/fsl/tests/test_filetree/custom.tree
similarity index 100%
rename from tests/test_filetree/custom.tree
rename to fsl/tests/test_filetree/custom.tree
diff --git a/tests/test_filetree/extract_vars.tree b/fsl/tests/test_filetree/extract_vars.tree
similarity index 100%
rename from tests/test_filetree/extract_vars.tree
rename to fsl/tests/test_filetree/extract_vars.tree
diff --git a/tests/test_filetree/format.tree b/fsl/tests/test_filetree/format.tree
similarity index 100%
rename from tests/test_filetree/format.tree
rename to fsl/tests/test_filetree/format.tree
diff --git a/tests/test_filetree/local_parent.tree b/fsl/tests/test_filetree/local_parent.tree
similarity index 100%
rename from tests/test_filetree/local_parent.tree
rename to fsl/tests/test_filetree/local_parent.tree
diff --git a/tests/test_filetree/parent.tree b/fsl/tests/test_filetree/parent.tree
similarity index 100%
rename from tests/test_filetree/parent.tree
rename to fsl/tests/test_filetree/parent.tree
diff --git a/tests/test_filetree/parent/opt_file_test.nii.gz b/fsl/tests/test_filetree/parent/opt_file_test.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_file_test.nii.gz
rename to fsl/tests/test_filetree/parent/opt_file_test.nii.gz
diff --git a/tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz b/fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz
rename to fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz
diff --git a/tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz b/fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz
rename to fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz
diff --git a/tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz b/fsl/tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz
rename to fsl/tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz
diff --git a/tests/test_filetree/parent/sub_file.nii.gz b/fsl/tests/test_filetree/parent/sub_file.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/sub_file.nii.gz
rename to fsl/tests/test_filetree/parent/sub_file.nii.gz
diff --git a/tests/test_filetree/test_query.py b/fsl/tests/test_filetree/test_query.py
similarity index 100%
rename from tests/test_filetree/test_query.py
rename to fsl/tests/test_filetree/test_query.py
diff --git a/tests/test_filetree/test_read.py b/fsl/tests/test_filetree/test_read.py
similarity index 100%
rename from tests/test_filetree/test_read.py
rename to fsl/tests/test_filetree/test_read.py
diff --git a/tests/test_filetree/test_registration.py b/fsl/tests/test_filetree/test_registration.py
similarity index 100%
rename from tests/test_filetree/test_registration.py
rename to fsl/tests/test_filetree/test_registration.py
diff --git a/tests/test_filetree/test_template.py b/fsl/tests/test_filetree/test_template.py
similarity index 100%
rename from tests/test_filetree/test_template.py
rename to fsl/tests/test_filetree/test_template.py
diff --git a/tests/test_fixlabels.py b/fsl/tests/test_fixlabels.py
similarity index 99%
rename from tests/test_fixlabels.py
rename to fsl/tests/test_fixlabels.py
index a6049d57b2ee45cc42e6b75f0d3b418d37b6121d..6d2844643220fd72491be5befb0cae22e71edd57 100644
--- a/tests/test_fixlabels.py
+++ b/fsl/tests/test_fixlabels.py
@@ -10,7 +10,7 @@ import textwrap
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.fixlabels as fixlabels
goodfiles = []
diff --git a/tests/test_freesurfer.py b/fsl/tests/test_freesurfer.py
similarity index 100%
rename from tests/test_freesurfer.py
rename to fsl/tests/test_freesurfer.py
diff --git a/tests/test_fsl_data_utils.py b/fsl/tests/test_fsl_data_utils.py
similarity index 100%
rename from tests/test_fsl_data_utils.py
rename to fsl/tests/test_fsl_data_utils.py
diff --git a/tests/test_fsl_utils_path.py b/fsl/tests/test_fsl_utils_path.py
similarity index 100%
rename from tests/test_fsl_utils_path.py
rename to fsl/tests/test_fsl_utils_path.py
diff --git a/tests/test_fslsub.py b/fsl/tests/test_fslsub.py
similarity index 100%
rename from tests/test_fslsub.py
rename to fsl/tests/test_fslsub.py
diff --git a/tests/test_gifti.py b/fsl/tests/test_gifti.py
similarity index 100%
rename from tests/test_gifti.py
rename to fsl/tests/test_gifti.py
diff --git a/tests/test_idle.py b/fsl/tests/test_idle.py
similarity index 100%
rename from tests/test_idle.py
rename to fsl/tests/test_idle.py
diff --git a/tests/test_image.py b/fsl/tests/test_image.py
similarity index 100%
rename from tests/test_image.py
rename to fsl/tests/test_image.py
diff --git a/tests/test_image_data_access.py b/fsl/tests/test_image_data_access.py
similarity index 100%
rename from tests/test_image_data_access.py
rename to fsl/tests/test_image_data_access.py
diff --git a/tests/test_image_resample.py b/fsl/tests/test_image_resample.py
similarity index 100%
rename from tests/test_image_resample.py
rename to fsl/tests/test_image_resample.py
diff --git a/tests/test_image_roi.py b/fsl/tests/test_image_roi.py
similarity index 100%
rename from tests/test_image_roi.py
rename to fsl/tests/test_image_roi.py
diff --git a/tests/test_immv_imcp.py b/fsl/tests/test_immv_imcp.py
similarity index 100%
rename from tests/test_immv_imcp.py
rename to fsl/tests/test_immv_imcp.py
diff --git a/tests/test_importall.py b/fsl/tests/test_importall.py
similarity index 100%
rename from tests/test_importall.py
rename to fsl/tests/test_importall.py
diff --git a/tests/test_melodicanalysis.py b/fsl/tests/test_melodicanalysis.py
similarity index 99%
rename from tests/test_melodicanalysis.py
rename to fsl/tests/test_melodicanalysis.py
index f80e4def0796c8bb176774336c8d11f674bd1b6b..6b4dbe6d4d2429cd203413160aca603c76990e8f 100644
--- a/tests/test_melodicanalysis.py
+++ b/fsl/tests/test_melodicanalysis.py
@@ -12,7 +12,7 @@ import itertools as it
import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.utils.path as fslpath
import fsl.data.melodicanalysis as mela
diff --git a/tests/test_melodicimage.py b/fsl/tests/test_melodicimage.py
similarity index 99%
rename from tests/test_melodicimage.py
rename to fsl/tests/test_melodicimage.py
index 9bf89f6e0d6ead111ef0d366b146ba2af3978c04..bb48e8916f3709c3e0d0090159649bb256c8f538 100644
--- a/tests/test_melodicimage.py
+++ b/fsl/tests/test_melodicimage.py
@@ -14,7 +14,7 @@ import nibabel as nib
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.image as fslimage
import fsl.data.melodicimage as meli
import fsl.data.melodicanalysis as mela
diff --git a/tests/test_memoize.py b/fsl/tests/test_memoize.py
similarity index 100%
rename from tests/test_memoize.py
rename to fsl/tests/test_memoize.py
diff --git a/tests/test_mesh.py b/fsl/tests/test_mesh.py
similarity index 100%
rename from tests/test_mesh.py
rename to fsl/tests/test_mesh.py
diff --git a/tests/test_meta.py b/fsl/tests/test_meta.py
similarity index 100%
rename from tests/test_meta.py
rename to fsl/tests/test_meta.py
diff --git a/tests/test_mghimage.py b/fsl/tests/test_mghimage.py
similarity index 100%
rename from tests/test_mghimage.py
rename to fsl/tests/test_mghimage.py
diff --git a/tests/test_naninfrange.py b/fsl/tests/test_naninfrange.py
similarity index 100%
rename from tests/test_naninfrange.py
rename to fsl/tests/test_naninfrange.py
diff --git a/tests/test_notifier.py b/fsl/tests/test_notifier.py
similarity index 100%
rename from tests/test_notifier.py
rename to fsl/tests/test_notifier.py
diff --git a/tests/test_parse_data.py b/fsl/tests/test_parse_data.py
similarity index 100%
rename from tests/test_parse_data.py
rename to fsl/tests/test_parse_data.py
diff --git a/tests/test_platform.py b/fsl/tests/test_platform.py
similarity index 100%
rename from tests/test_platform.py
rename to fsl/tests/test_platform.py
diff --git a/tests/test_run.py b/fsl/tests/test_run.py
similarity index 100%
rename from tests/test_run.py
rename to fsl/tests/test_run.py
diff --git a/tests/test_scripts/__init__.py b/fsl/tests/test_scripts/__init__.py
similarity index 100%
rename from tests/test_scripts/__init__.py
rename to fsl/tests/test_scripts/__init__.py
diff --git a/tests/test_scripts/test_atlasq_list_summary.py b/fsl/tests/test_scripts/test_atlasq_list_summary.py
similarity index 100%
rename from tests/test_scripts/test_atlasq_list_summary.py
rename to fsl/tests/test_scripts/test_atlasq_list_summary.py
diff --git a/tests/test_scripts/test_atlasq_ohi.py b/fsl/tests/test_scripts/test_atlasq_ohi.py
similarity index 100%
rename from tests/test_scripts/test_atlasq_ohi.py
rename to fsl/tests/test_scripts/test_atlasq_ohi.py
diff --git a/tests/test_scripts/test_atlasq_query.py b/fsl/tests/test_scripts/test_atlasq_query.py
similarity index 100%
rename from tests/test_scripts/test_atlasq_query.py
rename to fsl/tests/test_scripts/test_atlasq_query.py
diff --git a/tests/test_scripts/test_fsl_abspath.py b/fsl/tests/test_scripts/test_fsl_abspath.py
similarity index 94%
rename from tests/test_scripts/test_fsl_abspath.py
rename to fsl/tests/test_scripts/test_fsl_abspath.py
index 1657128978f003dc551789e00d4f24f161c797ae..e585bca20fb7c7bf2e05c78f14c4a31a46a6e371 100644
--- a/tests/test_scripts/test_fsl_abspath.py
+++ b/fsl/tests/test_scripts/test_fsl_abspath.py
@@ -10,7 +10,7 @@ import os.path as op
import fsl.scripts.fsl_abspath as fsl_abspath
-from tests import tempdir, CaptureStdout
+from fsl.tests import tempdir, CaptureStdout
def test_usage():
diff --git a/tests/test_scripts/test_fsl_apply_x5.py b/fsl/tests/test_scripts/test_fsl_apply_x5.py
similarity index 100%
rename from tests/test_scripts/test_fsl_apply_x5.py
rename to fsl/tests/test_scripts/test_fsl_apply_x5.py
diff --git a/tests/test_scripts/test_fsl_convert_x5.py b/fsl/tests/test_scripts/test_fsl_convert_x5.py
similarity index 100%
rename from tests/test_scripts/test_fsl_convert_x5.py
rename to fsl/tests/test_scripts/test_fsl_convert_x5.py
diff --git a/tests/test_scripts/test_fsl_ents.py b/fsl/tests/test_scripts/test_fsl_ents.py
similarity index 100%
rename from tests/test_scripts/test_fsl_ents.py
rename to fsl/tests/test_scripts/test_fsl_ents.py
diff --git a/tests/test_scripts/test_imglob.py b/fsl/tests/test_scripts/test_imglob.py
similarity index 100%
rename from tests/test_scripts/test_imglob.py
rename to fsl/tests/test_scripts/test_imglob.py
diff --git a/tests/test_scripts/test_imln.py b/fsl/tests/test_scripts/test_imln.py
similarity index 99%
rename from tests/test_scripts/test_imln.py
rename to fsl/tests/test_scripts/test_imln.py
index b9fea4e4fc00f9cf9b94370c801f4fb1d9a4606b..7821ceb844b3336b0f66d7cccd2de71722d50533 100644
--- a/tests/test_scripts/test_imln.py
+++ b/fsl/tests/test_scripts/test_imln.py
@@ -15,7 +15,7 @@ from fsl.utils.tempdir import tempdir
import fsl.utils.path as fslpath
import fsl.scripts.imln as imln
-from tests import touch
+from fsl.tests import touch
def test_usage():
diff --git a/tests/test_scripts/test_immv_imcp.py b/fsl/tests/test_scripts/test_immv_imcp.py
similarity index 100%
rename from tests/test_scripts/test_immv_imcp.py
rename to fsl/tests/test_scripts/test_immv_imcp.py
diff --git a/tests/test_scripts/test_imrm.py b/fsl/tests/test_scripts/test_imrm.py
similarity index 98%
rename from tests/test_scripts/test_imrm.py
rename to fsl/tests/test_scripts/test_imrm.py
index 8be4108683bbcffeab842c09c08aac58d5e36a97..cb4dd2c80382cc8a9ed9d53849a8e35c5342b76a 100644
--- a/tests/test_scripts/test_imrm.py
+++ b/fsl/tests/test_scripts/test_imrm.py
@@ -10,7 +10,7 @@ import os
from fsl.utils.tempdir import tempdir
import fsl.scripts.imrm as imrm
-from tests import touch
+from fsl.tests import touch
def test_imrm_usage():
assert imrm.main([]) != 0
diff --git a/tests/test_scripts/test_imtest.py b/fsl/tests/test_scripts/test_imtest.py
similarity index 98%
rename from tests/test_scripts/test_imtest.py
rename to fsl/tests/test_scripts/test_imtest.py
index 819afa959175391d8b6fc44c986fe7b12e2021b3..b81ab70f613e28fee50ed7232ed2eaaf354a0553 100644
--- a/tests/test_scripts/test_imtest.py
+++ b/fsl/tests/test_scripts/test_imtest.py
@@ -13,7 +13,7 @@ from fsl.utils.tempdir import tempdir
import fsl.scripts.imtest as imtest
-from tests import CaptureStdout, touch
+from fsl.tests import CaptureStdout, touch
def test_wrongargs():
diff --git a/tests/test_scripts/test_remove_ext.py b/fsl/tests/test_scripts/test_remove_ext.py
similarity index 95%
rename from tests/test_scripts/test_remove_ext.py
rename to fsl/tests/test_scripts/test_remove_ext.py
index bb65a893af9d8dd6f3b6abcb5f60b1f7b4e576d9..b0a512fab7b4f95ed198cd48cbbfd275afc9b57e 100644
--- a/tests/test_scripts/test_remove_ext.py
+++ b/fsl/tests/test_scripts/test_remove_ext.py
@@ -8,7 +8,7 @@
import fsl.scripts.remove_ext as remove_ext
-from tests import CaptureStdout
+from fsl.tests import CaptureStdout
def test_usage():
assert remove_ext.main([]) != 0
diff --git a/tests/test_scripts/test_resample_image.py b/fsl/tests/test_scripts/test_resample_image.py
similarity index 100%
rename from tests/test_scripts/test_resample_image.py
rename to fsl/tests/test_scripts/test_resample_image.py
diff --git a/tests/test_scripts/test_vest2text.py b/fsl/tests/test_scripts/test_vest2text.py
similarity index 98%
rename from tests/test_scripts/test_vest2text.py
rename to fsl/tests/test_scripts/test_vest2text.py
index 040c84e0dd471ab113f72de82ec3150da30b4b5f..7de7ec57f9f45f100c0d9a9889c78b34d3351e41 100644
--- a/tests/test_scripts/test_vest2text.py
+++ b/fsl/tests/test_scripts/test_vest2text.py
@@ -12,7 +12,7 @@ import fsl.data.vest as fslvest
import fsl.scripts.Text2Vest as Text2Vest
import fsl.scripts.Vest2Text as Vest2Text
-from tests import tempdir
+from fsl.tests import tempdir
def test_usage():
diff --git a/tests/test_settings.py b/fsl/tests/test_settings.py
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rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/tdof_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz
diff --git a/tests/testdata/test_mesh.vtk b/fsl/tests/testdata/test_mesh.vtk
similarity index 100%
rename from tests/testdata/test_mesh.vtk
rename to fsl/tests/testdata/test_mesh.vtk
diff --git a/tests/testdata/test_mesh_data.txt b/fsl/tests/testdata/test_mesh_data.txt
similarity index 100%
rename from tests/testdata/test_mesh_data.txt
rename to fsl/tests/testdata/test_mesh_data.txt
diff --git a/pyproject.toml b/pyproject.toml
index 5a0c74388e2a35e083cef3b24a4de112a188f061..c93fae593c05d0acfcde038f423c19a5b60b355e 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -85,7 +85,7 @@ include = ["fsl*"]
[tool.setuptools.package-data]
-fsl = ["utils/filetree/trees/*"]
+fsl = ["fsl/tests/testdata/*", "utils/filetree/trees/*"]
[tool.setuptools.dynamic]
@@ -94,11 +94,11 @@ version = {attr = "fsl.version.__version__"}
[tool.coverage.run]
include = ["fsl/*"]
-omit = ["fsl/data/imagewrapper.py"]
+omit = ["fsl/tests/*", "fsl/data/imagewrapper.py"]
[tool.pytest.ini_options]
-testpaths = ["tests"]
+testpaths = ["fsl/tests"]
addopts = "-v --cov=fsl --showlocals"
markers = [
"fsltest: Requires FSL",