From 00d062265cc192098819edca7cb8420e7b9be3a9 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Mon, 24 Jul 2023 17:35:23 +0100
Subject: [PATCH] TEST: Move tests into fsl package
---
MANIFEST.in | 6 ++++--
{tests => fsl/tests}/__init__.py | 0
{tests => fsl/tests}/conftest.py | 0
{tests => fsl/tests}/test_assertions.py | 0
{tests => fsl/tests}/test_atlases.py | 2 +-
{tests => fsl/tests}/test_atlases_query.py | 0
{tests => fsl/tests}/test_bids.py | 0
{tests => fsl/tests}/test_bitmap.py | 0
{tests => fsl/tests}/test_cache.py | 0
{tests => fsl/tests}/test_cifti.py | 2 +-
{tests => fsl/tests}/test_deprecated.py | 0
{tests => fsl/tests}/test_dicom.py | 0
{tests => fsl/tests}/test_dtifit.py | 2 +-
{tests => fsl/tests}/test_ensure.py | 0
{tests => fsl/tests}/test_featanalysis.py | 2 +-
{tests => fsl/tests}/test_featdesign.py | 2 +-
{tests => fsl/tests}/test_featimage.py | 4 ++--
{tests => fsl/tests}/test_filetree/__init__.py | 0
{tests => fsl/tests}/test_filetree/custom.tree | 0
.../tests}/test_filetree/extract_vars.tree | 0
{tests => fsl/tests}/test_filetree/format.tree | 0
.../tests}/test_filetree/local_parent.tree | 0
{tests => fsl/tests}/test_filetree/parent.tree | 0
.../test_filetree/parent/opt_file_test.nii.gz | 0
.../parent/opt_layer_test/opt_file_test.nii.gz | 0
.../parent/opt_layer_test/opt_file_test2.nii.gz | 0
.../parent/opt_layer_test/sub_file.nii.gz | 0
.../tests}/test_filetree/parent/sub_file.nii.gz | 0
{tests => fsl/tests}/test_filetree/test_query.py | 0
{tests => fsl/tests}/test_filetree/test_read.py | 0
.../tests}/test_filetree/test_registration.py | 0
{tests => fsl/tests}/test_filetree/test_template.py | 0
{tests => fsl/tests}/test_fixlabels.py | 2 +-
{tests => fsl/tests}/test_freesurfer.py | 0
{tests => fsl/tests}/test_fsl_data_utils.py | 0
{tests => fsl/tests}/test_fsl_utils_path.py | 0
{tests => fsl/tests}/test_fslsub.py | 0
{tests => fsl/tests}/test_gifti.py | 0
{tests => fsl/tests}/test_idle.py | 0
{tests => fsl/tests}/test_image.py | 0
{tests => fsl/tests}/test_image_data_access.py | 0
{tests => fsl/tests}/test_image_resample.py | 0
{tests => fsl/tests}/test_image_roi.py | 0
{tests => fsl/tests}/test_immv_imcp.py | 0
{tests => fsl/tests}/test_importall.py | 0
{tests => fsl/tests}/test_melodicanalysis.py | 2 +-
{tests => fsl/tests}/test_melodicimage.py | 2 +-
{tests => fsl/tests}/test_memoize.py | 0
{tests => fsl/tests}/test_mesh.py | 0
{tests => fsl/tests}/test_meta.py | 0
{tests => fsl/tests}/test_mghimage.py | 0
{tests => fsl/tests}/test_naninfrange.py | 0
{tests => fsl/tests}/test_notifier.py | 0
{tests => fsl/tests}/test_parse_data.py | 0
{tests => fsl/tests}/test_platform.py | 0
{tests => fsl/tests}/test_run.py | 0
{tests => fsl/tests}/test_scripts/__init__.py | 0
.../tests}/test_scripts/test_atlasq_list_summary.py | 0
.../tests}/test_scripts/test_atlasq_ohi.py | 0
.../tests}/test_scripts/test_atlasq_query.py | 0
.../tests}/test_scripts/test_fsl_abspath.py | 2 +-
.../tests}/test_scripts/test_fsl_apply_x5.py | 0
.../tests}/test_scripts/test_fsl_convert_x5.py | 0
{tests => fsl/tests}/test_scripts/test_fsl_ents.py | 0
{tests => fsl/tests}/test_scripts/test_imglob.py | 0
{tests => fsl/tests}/test_scripts/test_imln.py | 2 +-
{tests => fsl/tests}/test_scripts/test_immv_imcp.py | 0
{tests => fsl/tests}/test_scripts/test_imrm.py | 2 +-
{tests => fsl/tests}/test_scripts/test_imtest.py | 2 +-
.../tests}/test_scripts/test_remove_ext.py | 2 +-
.../tests}/test_scripts/test_resample_image.py | 0
{tests => fsl/tests}/test_scripts/test_vest2text.py | 2 +-
{tests => fsl/tests}/test_settings.py | 0
{tests => fsl/tests}/test_tempdir.py | 0
{tests => fsl/tests}/test_transform/__init__.py | 0
{tests => fsl/tests}/test_transform/test_affine.py | 0
{tests => fsl/tests}/test_transform/test_flirt.py | 0
{tests => fsl/tests}/test_transform/test_fnirt.py | 0
.../tests}/test_transform/test_nonlinear.py | 0
{tests => fsl/tests}/test_transform/test_x5.py | 0
.../testdata/nonlinear/coefficientfield.nii.gz | Bin
.../testdata/nonlinear/displacementfield.nii.gz | Bin
.../nonlinear/displacementfield_no_premat.nii.gz | Bin
.../test_transform/testdata/nonlinear/ref.nii.gz | Bin
.../test_transform/testdata/nonlinear/src.nii.gz | Bin
.../test_transform/testdata/nonlinear/src2ref.mat | 0
.../testdata/test_transform_test_axisBounds.txt | 0
.../testdata/test_transform_test_compose.txt | 0
.../testdata/test_transform_test_concat.txt | 0
.../test_transform_test_flirtMatrixToSform.txt | 0
.../testdata/test_transform_test_invert.txt | 0
.../test_transform_test_scaleoffsetxform.txt | 0
.../testdata/test_transform_test_transform_00.txt | 0
.../testdata/test_transform_test_transform_01.txt | 0
.../testdata/test_transform_test_transform_02.txt | 0
.../testdata/test_transform_test_transform_03.txt | 0
.../testdata/test_transform_test_transform_04.txt | 0
.../testdata/test_transform_test_transform_05.txt | 0
.../testdata/test_transform_test_transform_06.txt | 0
.../testdata/test_transform_test_transform_07.txt | 0
.../testdata/test_transform_test_transform_08.txt | 0
.../testdata/test_transform_test_transform_09.txt | 0
.../testdata/test_transform_test_transform_10.txt | 0
.../testdata/test_transform_test_transform_11.txt | 0
.../testdata/test_transform_test_transform_12.txt | 0
.../testdata/test_transform_test_transform_13.txt | 0
.../testdata/test_transform_test_transform_14.txt | 0
.../testdata/test_transform_test_transform_15.txt | 0
.../testdata/test_transform_test_transform_16.txt | 0
.../testdata/test_transform_test_transform_17.txt | 0
.../testdata/test_transform_test_transform_18.txt | 0
.../testdata/test_transform_test_transform_19.txt | 0
.../testdata/test_transform_test_transform_20.txt | 0
.../test_transform_test_transform_coords.txt | 0
{tests => fsl/tests}/test_version.py | 0
{tests => fsl/tests}/test_vest.py | 0
{tests => fsl/tests}/test_volumelabels.py | 0
{tests => fsl/tests}/test_vtk.py | 0
{tests => fsl/tests}/test_weakfuncref.py | 0
{tests => fsl/tests}/test_wrappers/__init__.py | 0
{tests => fsl/tests}/test_wrappers/test_fslmaths.py | 0
{tests => fsl/tests}/test_wrappers/test_fslstats.py | 0
{tests => fsl/tests}/test_wrappers/test_wrappers.py | 0
.../test_wrappers/test_wrappers_run_arguments.py | 0
.../tests}/test_wrappers/test_wrapperutils.py | 0
{tests => fsl/tests}/testdata/example.mgz | Bin
{tests => fsl/tests}/testdata/example.shape.gii | 0
{tests => fsl/tests}/testdata/example.surf.gii | 0
{tests => fsl/tests}/testdata/example4D.shape.gii | 0
.../testdata/example4D_multiple_darrays.shape.gii | 0
{tests => fsl/tests}/testdata/example_bad1.surf.gii | 0
{tests => fsl/tests}/testdata/example_bad2.surf.gii | 0
{tests => fsl/tests}/testdata/example_bad3.surf.gii | 0
{tests => fsl/tests}/testdata/example_bad4.surf.gii | 0
{tests => fsl/tests}/testdata/example_bad5.surf.gii | 0
{tests => fsl/tests}/testdata/example_bad6.surf.gii | 0
{tests => fsl/tests}/testdata/example_dicom.tbz2 | Bin
.../test_feat/1stlevel_1.feat/absbrainthresh.txt | 0
.../1stlevel_1.feat/cluster_mask_zstat1.nii.gz | 0
.../1stlevel_1.feat/cluster_mask_zstat2.nii.gz | 0
.../test_feat/1stlevel_1.feat/cluster_zstat1.txt | 0
.../1stlevel_1.feat/cluster_zstat1_std.txt | 0
.../test_feat/1stlevel_1.feat/cluster_zstat2.txt | 0
.../1stlevel_1.feat/cluster_zstat2_std.txt | 0
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.../testdata/test_feat/1stlevel_1.feat/design.frf | 0
.../testdata/test_feat/1stlevel_1.feat/design.fsf | 0
.../testdata/test_feat/1stlevel_1.feat/design.mat | 0
.../testdata/test_feat/1stlevel_1.feat/design.min | 0
.../testdata/test_feat/1stlevel_1.feat/design.trg | 0
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.../1stlevel_1.feat/filtered_func_data.nii.gz | 0
.../test_feat/1stlevel_1.feat/lmax_zstat1.txt | 0
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.../test_feat/1stlevel_1.feat/lmax_zstat2.txt | 0
.../test_feat/1stlevel_1.feat/lmax_zstat2_std.txt | 0
.../testdata/test_feat/1stlevel_1.feat/mask.nii.gz | 0
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{tests => fsl/tests}/testdata/test_mesh.vtk | 0
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pyproject.toml | 6 +++---
882 files changed, 23 insertions(+), 21 deletions(-)
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rename {tests => fsl/tests}/test_scripts/test_atlasq_query.py (100%)
rename {tests => fsl/tests}/test_scripts/test_fsl_abspath.py (94%)
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rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/design.con (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz (100%)
rename {tests => fsl/tests}/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz (100%)
rename {tests => fsl/tests}/testdata/test_mesh.vtk (100%)
rename {tests => fsl/tests}/testdata/test_mesh_data.txt (100%)
diff --git a/MANIFEST.in b/MANIFEST.in
index 60d1bd0ca..0b7cafe9c 100644
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -1,5 +1,7 @@
include AUTHOR
include CHANGELOG.rst
include COPYRIGHT
-recursive-include doc *
-recursive-include tests *
+include LICENSE
+include README.rst
+recursive-include doc *
+recursive-include fsl/tests *
diff --git a/tests/__init__.py b/fsl/tests/__init__.py
similarity index 100%
rename from tests/__init__.py
rename to fsl/tests/__init__.py
diff --git a/tests/conftest.py b/fsl/tests/conftest.py
similarity index 100%
rename from tests/conftest.py
rename to fsl/tests/conftest.py
diff --git a/tests/test_assertions.py b/fsl/tests/test_assertions.py
similarity index 100%
rename from tests/test_assertions.py
rename to fsl/tests/test_assertions.py
diff --git a/tests/test_atlases.py b/fsl/tests/test_atlases.py
similarity index 99%
rename from tests/test_atlases.py
rename to fsl/tests/test_atlases.py
index ccc73b278..623858c21 100644
--- a/tests/test_atlases.py
+++ b/fsl/tests/test_atlases.py
@@ -17,7 +17,7 @@ import numpy as np
from unittest import mock
import pytest
-import tests
+import fsl.tests as tests
import fsl.utils.image.resample as resample
import fsl.data.atlases as atlases
import fsl.data.image as fslimage
diff --git a/tests/test_atlases_query.py b/fsl/tests/test_atlases_query.py
similarity index 100%
rename from tests/test_atlases_query.py
rename to fsl/tests/test_atlases_query.py
diff --git a/tests/test_bids.py b/fsl/tests/test_bids.py
similarity index 100%
rename from tests/test_bids.py
rename to fsl/tests/test_bids.py
diff --git a/tests/test_bitmap.py b/fsl/tests/test_bitmap.py
similarity index 100%
rename from tests/test_bitmap.py
rename to fsl/tests/test_bitmap.py
diff --git a/tests/test_cache.py b/fsl/tests/test_cache.py
similarity index 100%
rename from tests/test_cache.py
rename to fsl/tests/test_cache.py
diff --git a/tests/test_cifti.py b/fsl/tests/test_cifti.py
similarity index 99%
rename from tests/test_cifti.py
rename to fsl/tests/test_cifti.py
index d0b758f2b..2e496f229 100644
--- a/tests/test_cifti.py
+++ b/fsl/tests/test_cifti.py
@@ -3,7 +3,7 @@ import os.path as op
import numpy as np
import nibabel as nib
from numpy import testing
-import tests
+import fsl.tests as tests
from nibabel.cifti2 import cifti2_axes
diff --git a/tests/test_deprecated.py b/fsl/tests/test_deprecated.py
similarity index 100%
rename from tests/test_deprecated.py
rename to fsl/tests/test_deprecated.py
diff --git a/tests/test_dicom.py b/fsl/tests/test_dicom.py
similarity index 100%
rename from tests/test_dicom.py
rename to fsl/tests/test_dicom.py
diff --git a/tests/test_dtifit.py b/fsl/tests/test_dtifit.py
similarity index 99%
rename from tests/test_dtifit.py
rename to fsl/tests/test_dtifit.py
index 00fc058ff..cb5026940 100644
--- a/tests/test_dtifit.py
+++ b/fsl/tests/test_dtifit.py
@@ -10,7 +10,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.dtifit as dtifit
import fsl.data.image as fslimage
diff --git a/tests/test_ensure.py b/fsl/tests/test_ensure.py
similarity index 100%
rename from tests/test_ensure.py
rename to fsl/tests/test_ensure.py
diff --git a/tests/test_featanalysis.py b/fsl/tests/test_featanalysis.py
similarity index 99%
rename from tests/test_featanalysis.py
rename to fsl/tests/test_featanalysis.py
index 96445cdbd..6f07109ed 100644
--- a/tests/test_featanalysis.py
+++ b/fsl/tests/test_featanalysis.py
@@ -17,7 +17,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.featanalysis as featanalysis
import fsl.data.featdesign as featdesign
import fsl.data.image as fslimage
diff --git a/tests/test_featdesign.py b/fsl/tests/test_featdesign.py
similarity index 99%
rename from tests/test_featdesign.py
rename to fsl/tests/test_featdesign.py
index 5c5d1a7e3..e8ffdecec 100644
--- a/tests/test_featdesign.py
+++ b/fsl/tests/test_featdesign.py
@@ -108,7 +108,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
from fsl.utils.tempdir import tempdir
import fsl.data.featdesign as featdesign
import fsl.data.featanalysis as featanalysis
diff --git a/tests/test_featimage.py b/fsl/tests/test_featimage.py
similarity index 99%
rename from tests/test_featimage.py
rename to fsl/tests/test_featimage.py
index fb33c6e4d..370e79736 100644
--- a/tests/test_featimage.py
+++ b/fsl/tests/test_featimage.py
@@ -16,7 +16,7 @@ import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.featimage as featimage
import fsl.data.featdesign as featdesign
import fsl.data.featanalysis as featanalysis
@@ -138,7 +138,7 @@ def test_FEATImage_imageAccessors():
shape = TEST_ANALYSES[featdir]['shape']
xform = TEST_ANALYSES[featdir]['xform']
-
+
with tests.testdir() as testdir:
if 'realdata' not in featdir:
diff --git a/tests/test_filetree/__init__.py b/fsl/tests/test_filetree/__init__.py
similarity index 100%
rename from tests/test_filetree/__init__.py
rename to fsl/tests/test_filetree/__init__.py
diff --git a/tests/test_filetree/custom.tree b/fsl/tests/test_filetree/custom.tree
similarity index 100%
rename from tests/test_filetree/custom.tree
rename to fsl/tests/test_filetree/custom.tree
diff --git a/tests/test_filetree/extract_vars.tree b/fsl/tests/test_filetree/extract_vars.tree
similarity index 100%
rename from tests/test_filetree/extract_vars.tree
rename to fsl/tests/test_filetree/extract_vars.tree
diff --git a/tests/test_filetree/format.tree b/fsl/tests/test_filetree/format.tree
similarity index 100%
rename from tests/test_filetree/format.tree
rename to fsl/tests/test_filetree/format.tree
diff --git a/tests/test_filetree/local_parent.tree b/fsl/tests/test_filetree/local_parent.tree
similarity index 100%
rename from tests/test_filetree/local_parent.tree
rename to fsl/tests/test_filetree/local_parent.tree
diff --git a/tests/test_filetree/parent.tree b/fsl/tests/test_filetree/parent.tree
similarity index 100%
rename from tests/test_filetree/parent.tree
rename to fsl/tests/test_filetree/parent.tree
diff --git a/tests/test_filetree/parent/opt_file_test.nii.gz b/fsl/tests/test_filetree/parent/opt_file_test.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_file_test.nii.gz
rename to fsl/tests/test_filetree/parent/opt_file_test.nii.gz
diff --git a/tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz b/fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz
rename to fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test.nii.gz
diff --git a/tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz b/fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz
rename to fsl/tests/test_filetree/parent/opt_layer_test/opt_file_test2.nii.gz
diff --git a/tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz b/fsl/tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz
rename to fsl/tests/test_filetree/parent/opt_layer_test/sub_file.nii.gz
diff --git a/tests/test_filetree/parent/sub_file.nii.gz b/fsl/tests/test_filetree/parent/sub_file.nii.gz
similarity index 100%
rename from tests/test_filetree/parent/sub_file.nii.gz
rename to fsl/tests/test_filetree/parent/sub_file.nii.gz
diff --git a/tests/test_filetree/test_query.py b/fsl/tests/test_filetree/test_query.py
similarity index 100%
rename from tests/test_filetree/test_query.py
rename to fsl/tests/test_filetree/test_query.py
diff --git a/tests/test_filetree/test_read.py b/fsl/tests/test_filetree/test_read.py
similarity index 100%
rename from tests/test_filetree/test_read.py
rename to fsl/tests/test_filetree/test_read.py
diff --git a/tests/test_filetree/test_registration.py b/fsl/tests/test_filetree/test_registration.py
similarity index 100%
rename from tests/test_filetree/test_registration.py
rename to fsl/tests/test_filetree/test_registration.py
diff --git a/tests/test_filetree/test_template.py b/fsl/tests/test_filetree/test_template.py
similarity index 100%
rename from tests/test_filetree/test_template.py
rename to fsl/tests/test_filetree/test_template.py
diff --git a/tests/test_fixlabels.py b/fsl/tests/test_fixlabels.py
similarity index 99%
rename from tests/test_fixlabels.py
rename to fsl/tests/test_fixlabels.py
index a6049d57b..6d2844643 100644
--- a/tests/test_fixlabels.py
+++ b/fsl/tests/test_fixlabels.py
@@ -10,7 +10,7 @@ import textwrap
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.fixlabels as fixlabels
goodfiles = []
diff --git a/tests/test_freesurfer.py b/fsl/tests/test_freesurfer.py
similarity index 100%
rename from tests/test_freesurfer.py
rename to fsl/tests/test_freesurfer.py
diff --git a/tests/test_fsl_data_utils.py b/fsl/tests/test_fsl_data_utils.py
similarity index 100%
rename from tests/test_fsl_data_utils.py
rename to fsl/tests/test_fsl_data_utils.py
diff --git a/tests/test_fsl_utils_path.py b/fsl/tests/test_fsl_utils_path.py
similarity index 100%
rename from tests/test_fsl_utils_path.py
rename to fsl/tests/test_fsl_utils_path.py
diff --git a/tests/test_fslsub.py b/fsl/tests/test_fslsub.py
similarity index 100%
rename from tests/test_fslsub.py
rename to fsl/tests/test_fslsub.py
diff --git a/tests/test_gifti.py b/fsl/tests/test_gifti.py
similarity index 100%
rename from tests/test_gifti.py
rename to fsl/tests/test_gifti.py
diff --git a/tests/test_idle.py b/fsl/tests/test_idle.py
similarity index 100%
rename from tests/test_idle.py
rename to fsl/tests/test_idle.py
diff --git a/tests/test_image.py b/fsl/tests/test_image.py
similarity index 100%
rename from tests/test_image.py
rename to fsl/tests/test_image.py
diff --git a/tests/test_image_data_access.py b/fsl/tests/test_image_data_access.py
similarity index 100%
rename from tests/test_image_data_access.py
rename to fsl/tests/test_image_data_access.py
diff --git a/tests/test_image_resample.py b/fsl/tests/test_image_resample.py
similarity index 100%
rename from tests/test_image_resample.py
rename to fsl/tests/test_image_resample.py
diff --git a/tests/test_image_roi.py b/fsl/tests/test_image_roi.py
similarity index 100%
rename from tests/test_image_roi.py
rename to fsl/tests/test_image_roi.py
diff --git a/tests/test_immv_imcp.py b/fsl/tests/test_immv_imcp.py
similarity index 100%
rename from tests/test_immv_imcp.py
rename to fsl/tests/test_immv_imcp.py
diff --git a/tests/test_importall.py b/fsl/tests/test_importall.py
similarity index 100%
rename from tests/test_importall.py
rename to fsl/tests/test_importall.py
diff --git a/tests/test_melodicanalysis.py b/fsl/tests/test_melodicanalysis.py
similarity index 99%
rename from tests/test_melodicanalysis.py
rename to fsl/tests/test_melodicanalysis.py
index f80e4def0..6b4dbe6d4 100644
--- a/tests/test_melodicanalysis.py
+++ b/fsl/tests/test_melodicanalysis.py
@@ -12,7 +12,7 @@ import itertools as it
import numpy as np
import pytest
-import tests
+import fsl.tests as tests
import fsl.utils.path as fslpath
import fsl.data.melodicanalysis as mela
diff --git a/tests/test_melodicimage.py b/fsl/tests/test_melodicimage.py
similarity index 99%
rename from tests/test_melodicimage.py
rename to fsl/tests/test_melodicimage.py
index 9bf89f6e0..bb48e8916 100644
--- a/tests/test_melodicimage.py
+++ b/fsl/tests/test_melodicimage.py
@@ -14,7 +14,7 @@ import nibabel as nib
import pytest
-import tests
+import fsl.tests as tests
import fsl.data.image as fslimage
import fsl.data.melodicimage as meli
import fsl.data.melodicanalysis as mela
diff --git a/tests/test_memoize.py b/fsl/tests/test_memoize.py
similarity index 100%
rename from tests/test_memoize.py
rename to fsl/tests/test_memoize.py
diff --git a/tests/test_mesh.py b/fsl/tests/test_mesh.py
similarity index 100%
rename from tests/test_mesh.py
rename to fsl/tests/test_mesh.py
diff --git a/tests/test_meta.py b/fsl/tests/test_meta.py
similarity index 100%
rename from tests/test_meta.py
rename to fsl/tests/test_meta.py
diff --git a/tests/test_mghimage.py b/fsl/tests/test_mghimage.py
similarity index 100%
rename from tests/test_mghimage.py
rename to fsl/tests/test_mghimage.py
diff --git a/tests/test_naninfrange.py b/fsl/tests/test_naninfrange.py
similarity index 100%
rename from tests/test_naninfrange.py
rename to fsl/tests/test_naninfrange.py
diff --git a/tests/test_notifier.py b/fsl/tests/test_notifier.py
similarity index 100%
rename from tests/test_notifier.py
rename to fsl/tests/test_notifier.py
diff --git a/tests/test_parse_data.py b/fsl/tests/test_parse_data.py
similarity index 100%
rename from tests/test_parse_data.py
rename to fsl/tests/test_parse_data.py
diff --git a/tests/test_platform.py b/fsl/tests/test_platform.py
similarity index 100%
rename from tests/test_platform.py
rename to fsl/tests/test_platform.py
diff --git a/tests/test_run.py b/fsl/tests/test_run.py
similarity index 100%
rename from tests/test_run.py
rename to fsl/tests/test_run.py
diff --git a/tests/test_scripts/__init__.py b/fsl/tests/test_scripts/__init__.py
similarity index 100%
rename from tests/test_scripts/__init__.py
rename to fsl/tests/test_scripts/__init__.py
diff --git a/tests/test_scripts/test_atlasq_list_summary.py b/fsl/tests/test_scripts/test_atlasq_list_summary.py
similarity index 100%
rename from tests/test_scripts/test_atlasq_list_summary.py
rename to fsl/tests/test_scripts/test_atlasq_list_summary.py
diff --git a/tests/test_scripts/test_atlasq_ohi.py b/fsl/tests/test_scripts/test_atlasq_ohi.py
similarity index 100%
rename from tests/test_scripts/test_atlasq_ohi.py
rename to fsl/tests/test_scripts/test_atlasq_ohi.py
diff --git a/tests/test_scripts/test_atlasq_query.py b/fsl/tests/test_scripts/test_atlasq_query.py
similarity index 100%
rename from tests/test_scripts/test_atlasq_query.py
rename to fsl/tests/test_scripts/test_atlasq_query.py
diff --git a/tests/test_scripts/test_fsl_abspath.py b/fsl/tests/test_scripts/test_fsl_abspath.py
similarity index 94%
rename from tests/test_scripts/test_fsl_abspath.py
rename to fsl/tests/test_scripts/test_fsl_abspath.py
index 165712897..e585bca20 100644
--- a/tests/test_scripts/test_fsl_abspath.py
+++ b/fsl/tests/test_scripts/test_fsl_abspath.py
@@ -10,7 +10,7 @@ import os.path as op
import fsl.scripts.fsl_abspath as fsl_abspath
-from tests import tempdir, CaptureStdout
+from fsl.tests import tempdir, CaptureStdout
def test_usage():
diff --git a/tests/test_scripts/test_fsl_apply_x5.py b/fsl/tests/test_scripts/test_fsl_apply_x5.py
similarity index 100%
rename from tests/test_scripts/test_fsl_apply_x5.py
rename to fsl/tests/test_scripts/test_fsl_apply_x5.py
diff --git a/tests/test_scripts/test_fsl_convert_x5.py b/fsl/tests/test_scripts/test_fsl_convert_x5.py
similarity index 100%
rename from tests/test_scripts/test_fsl_convert_x5.py
rename to fsl/tests/test_scripts/test_fsl_convert_x5.py
diff --git a/tests/test_scripts/test_fsl_ents.py b/fsl/tests/test_scripts/test_fsl_ents.py
similarity index 100%
rename from tests/test_scripts/test_fsl_ents.py
rename to fsl/tests/test_scripts/test_fsl_ents.py
diff --git a/tests/test_scripts/test_imglob.py b/fsl/tests/test_scripts/test_imglob.py
similarity index 100%
rename from tests/test_scripts/test_imglob.py
rename to fsl/tests/test_scripts/test_imglob.py
diff --git a/tests/test_scripts/test_imln.py b/fsl/tests/test_scripts/test_imln.py
similarity index 99%
rename from tests/test_scripts/test_imln.py
rename to fsl/tests/test_scripts/test_imln.py
index b9fea4e4f..7821ceb84 100644
--- a/tests/test_scripts/test_imln.py
+++ b/fsl/tests/test_scripts/test_imln.py
@@ -15,7 +15,7 @@ from fsl.utils.tempdir import tempdir
import fsl.utils.path as fslpath
import fsl.scripts.imln as imln
-from tests import touch
+from fsl.tests import touch
def test_usage():
diff --git a/tests/test_scripts/test_immv_imcp.py b/fsl/tests/test_scripts/test_immv_imcp.py
similarity index 100%
rename from tests/test_scripts/test_immv_imcp.py
rename to fsl/tests/test_scripts/test_immv_imcp.py
diff --git a/tests/test_scripts/test_imrm.py b/fsl/tests/test_scripts/test_imrm.py
similarity index 98%
rename from tests/test_scripts/test_imrm.py
rename to fsl/tests/test_scripts/test_imrm.py
index 8be410868..cb4dd2c80 100644
--- a/tests/test_scripts/test_imrm.py
+++ b/fsl/tests/test_scripts/test_imrm.py
@@ -10,7 +10,7 @@ import os
from fsl.utils.tempdir import tempdir
import fsl.scripts.imrm as imrm
-from tests import touch
+from fsl.tests import touch
def test_imrm_usage():
assert imrm.main([]) != 0
diff --git a/tests/test_scripts/test_imtest.py b/fsl/tests/test_scripts/test_imtest.py
similarity index 98%
rename from tests/test_scripts/test_imtest.py
rename to fsl/tests/test_scripts/test_imtest.py
index 819afa959..b81ab70f6 100644
--- a/tests/test_scripts/test_imtest.py
+++ b/fsl/tests/test_scripts/test_imtest.py
@@ -13,7 +13,7 @@ from fsl.utils.tempdir import tempdir
import fsl.scripts.imtest as imtest
-from tests import CaptureStdout, touch
+from fsl.tests import CaptureStdout, touch
def test_wrongargs():
diff --git a/tests/test_scripts/test_remove_ext.py b/fsl/tests/test_scripts/test_remove_ext.py
similarity index 95%
rename from tests/test_scripts/test_remove_ext.py
rename to fsl/tests/test_scripts/test_remove_ext.py
index bb65a893a..b0a512fab 100644
--- a/tests/test_scripts/test_remove_ext.py
+++ b/fsl/tests/test_scripts/test_remove_ext.py
@@ -8,7 +8,7 @@
import fsl.scripts.remove_ext as remove_ext
-from tests import CaptureStdout
+from fsl.tests import CaptureStdout
def test_usage():
assert remove_ext.main([]) != 0
diff --git a/tests/test_scripts/test_resample_image.py b/fsl/tests/test_scripts/test_resample_image.py
similarity index 100%
rename from tests/test_scripts/test_resample_image.py
rename to fsl/tests/test_scripts/test_resample_image.py
diff --git a/tests/test_scripts/test_vest2text.py b/fsl/tests/test_scripts/test_vest2text.py
similarity index 98%
rename from tests/test_scripts/test_vest2text.py
rename to fsl/tests/test_scripts/test_vest2text.py
index 040c84e0d..7de7ec57f 100644
--- a/tests/test_scripts/test_vest2text.py
+++ b/fsl/tests/test_scripts/test_vest2text.py
@@ -12,7 +12,7 @@ import fsl.data.vest as fslvest
import fsl.scripts.Text2Vest as Text2Vest
import fsl.scripts.Vest2Text as Vest2Text
-from tests import tempdir
+from fsl.tests import tempdir
def test_usage():
diff --git a/tests/test_settings.py b/fsl/tests/test_settings.py
similarity index 100%
rename from tests/test_settings.py
rename to fsl/tests/test_settings.py
diff --git a/tests/test_tempdir.py b/fsl/tests/test_tempdir.py
similarity index 100%
rename from tests/test_tempdir.py
rename to fsl/tests/test_tempdir.py
diff --git a/tests/test_transform/__init__.py b/fsl/tests/test_transform/__init__.py
similarity index 100%
rename from tests/test_transform/__init__.py
rename to fsl/tests/test_transform/__init__.py
diff --git a/tests/test_transform/test_affine.py b/fsl/tests/test_transform/test_affine.py
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rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/tdof_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/thresh_zstat1.vol
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope1.feat/var_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/.flame
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_mask_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/cluster_zstat1_std.txt
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.con
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.fsf
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.grp
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lcon
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.lev
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/design.mat
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/example_func.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/lmax_zstat1_std.txt
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mask.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/mean_func.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/rendered_thresh_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/cope1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/dof
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/logfile
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/mean_random_effects_var1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/pe1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/res4d.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/smoothness
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tdof_t1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/tstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/varcope1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/weights1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1lowertstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zflame1uppertstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/stats/zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/tdof_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/thresh_zstat1.vol
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/cope2.feat/var_filtered_func_data.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.con
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.fsf
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.grp
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.lcon
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/design.mat
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mask.nii.gz
diff --git a/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz b/fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz
similarity index 100%
rename from tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz
rename to fsl/tests/testdata/test_feat/2ndlevel_realdata.gfeat/mean_func.nii.gz
diff --git a/tests/testdata/test_mesh.vtk b/fsl/tests/testdata/test_mesh.vtk
similarity index 100%
rename from tests/testdata/test_mesh.vtk
rename to fsl/tests/testdata/test_mesh.vtk
diff --git a/tests/testdata/test_mesh_data.txt b/fsl/tests/testdata/test_mesh_data.txt
similarity index 100%
rename from tests/testdata/test_mesh_data.txt
rename to fsl/tests/testdata/test_mesh_data.txt
diff --git a/pyproject.toml b/pyproject.toml
index 5a0c74388..c93fae593 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -85,7 +85,7 @@ include = ["fsl*"]
[tool.setuptools.package-data]
-fsl = ["utils/filetree/trees/*"]
+fsl = ["fsl/tests/testdata/*", "utils/filetree/trees/*"]
[tool.setuptools.dynamic]
@@ -94,11 +94,11 @@ version = {attr = "fsl.version.__version__"}
[tool.coverage.run]
include = ["fsl/*"]
-omit = ["fsl/data/imagewrapper.py"]
+omit = ["fsl/tests/*", "fsl/data/imagewrapper.py"]
[tool.pytest.ini_options]
-testpaths = ["tests"]
+testpaths = ["fsl/tests"]
addopts = "-v --cov=fsl --showlocals"
markers = [
"fsltest: Requires FSL",
--
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