diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml new file mode 100644 index 0000000000000000000000000000000000000000..f562dfa280375dc6fd3be7f3701b46d3707184bf --- /dev/null +++ b/.gitlab-ci.yml @@ -0,0 +1,5 @@ +image: python:2.7 + +test: + - cat requirements.txt | xargs -n 1 pip install + - python setup.py test diff --git a/requirements.txt b/requirements.txt new file mode 100644 index 0000000000000000000000000000000000000000..29b378c4b39b8b1dd30824cb3d1fda0ec9c987c1 --- /dev/null +++ b/requirements.txt @@ -0,0 +1,7 @@ +cython>=0.24 +six>=1.10.0 +numpy>=1.11.1 +matplotlib>=1.5.1 +nibabel>=2.0.2 +git+https://github.com/pauldmccarthy/indexed_gzip.git#egg=indexed_gzip +git+ssh://git@git.fmrib.ox.ac.uk/paulmc/props.git#egg=props diff --git a/setup.cfg b/setup.cfg new file mode 100644 index 0000000000000000000000000000000000000000..9af7e6f11bb01f7306f796faf7bfbe3e2955cd94 --- /dev/null +++ b/setup.cfg @@ -0,0 +1,2 @@ +[aliases] +test=pytest \ No newline at end of file diff --git a/setup.py b/setup.py index b51d54995282a151d5f6a1f07d434d47521e7c55..932946572238283e11f053536c54e262598ff9b6 100644 --- a/setup.py +++ b/setup.py @@ -23,6 +23,11 @@ version = {} with open(op.join(basedir, "fsl", "version.py")) as f: exec(f.read(), version) +install_requires = open(op.join(basedir, 'requirements.txt'), 'rt').readlines() + +dependency_links = [i for i in install_requires if i.startswith('git')] +install_requires = [i for i in install_requires if not i.startswith('git')] + setup( name='fslpy', @@ -48,12 +53,10 @@ setup( packages=find_packages(exclude=('doc')), - install_requires=[ - 'pyopengl>=3.1.0', - 'pyparsing>=2.0.3', - 'numpy>=1.8.1', - 'scipy>=0.14.0', - 'matplotlib>=1.3.1', - 'nibabel>=1.3.0', - 'Pillow>=2.5.3'], + install_requires=install_requires, + dependency_links=dependency_links, + + setup_requires=['pytest-runner'], + tests_require=['pytest', 'pytest-runner'], + test_suite='tests', ) diff --git a/test/test_imagewrapper.py b/tests/test_imagewrapper.py similarity index 100% rename from test/test_imagewrapper.py rename to tests/test_imagewrapper.py