From 15e66320b713878c1281a575fd9a62abb8a778c4 Mon Sep 17 00:00:00 2001
From: Michiel Cottaar <MichielCottaar@protonmail.com>
Date: Thu, 11 Jun 2020 15:41:07 +0100
Subject: [PATCH] BUG: default to run fsl_sub in full current environment
---
fsl/utils/fslsub.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/fsl/utils/fslsub.py b/fsl/utils/fslsub.py
index a3496b08f..79e91a79c 100644
--- a/fsl/utils/fslsub.py
+++ b/fsl/utils/fslsub.py
@@ -124,7 +124,7 @@ class SubmitParams(object):
If not set explicitly by the user don't alter the environment in which the script will be submitted
"""
if self.env is None:
- self.env = {}
+ self.env = dict(os.environ)
def as_flags(self, ):
"""
--
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