From 343ec8643e9deb145b13c9849c6610fdba980658 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 12 Nov 2021 11:10:05 +0000
Subject: [PATCH] RF: Check that mapped nifti file exists, save to new temp
file if not.
---
fsl/wrappers/wrapperutils.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/fsl/wrappers/wrapperutils.py b/fsl/wrappers/wrapperutils.py
index 260841d4b..aab71b90c 100644
--- a/fsl/wrappers/wrapperutils.py
+++ b/fsl/wrappers/wrapperutils.py
@@ -1046,7 +1046,7 @@ def fileOrImage(*args, **kwargs):
# in-memory image - we have
# to save it out to a file
- if infile is None:
+ if infile is None or not op.exists(infile):
hd, infile = tempfile.mkstemp(fslimage.defaultExt(),
dir=workdir)
os.close(hd)
--
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