From 8cb90f6af7f69d7ec66f11062b04e4ec3c48afaf Mon Sep 17 00:00:00 2001
From: Martin Craig <martin.craig@eng.ox.ac.uk>
Date: Mon, 20 Apr 2020 14:08:18 +0100
Subject: [PATCH] Add short options which should be treated as switches.
Previously only the long versions of options were correctly flagged as
booleans, but the -b and -B options do not have long alternatives so they
need to be supported too. And for familiarity to command line users we should
support other single-char switches too
---
fsl/wrappers/fast.py | 7 +++++++
1 file changed, 7 insertions(+)
diff --git a/fsl/wrappers/fast.py b/fsl/wrappers/fast.py
index 5dbe2a412..b3e45499c 100644
--- a/fsl/wrappers/fast.py
+++ b/fsl/wrappers/fast.py
@@ -35,9 +35,16 @@ def fast(imgs, out='fast', **kwargs):
valmap = {
'nobias' : wutils.SHOW_IF_TRUE,
+ 'N' : wutils.SHOW_IF_TRUE,
'verbose' : wutils.SHOW_IF_TRUE,
+ 'v' : wutils.SHOW_IF_TRUE,
'Prior' : wutils.SHOW_IF_TRUE,
+ 'P' : wutils.SHOW_IF_TRUE,
'segments' : wutils.SHOW_IF_TRUE,
+ 'g' : wutils.SHOW_IF_TRUE,
+ 'b' : wutils.SHOW_IF_TRUE,
+ 'B' : wutils.SHOW_IF_TRUE,
+ 'p' : wutils.SHOW_IF_TRUE,
}
argmap = {
--
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