From a0ed61508b070342dba34152a63c8afe3437d4db Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauld.mccarthy@gmail.com>
Date: Mon, 13 Jul 2015 11:59:13 +0100
Subject: [PATCH] More functionality added to ClusterPanel - cluster
coordinates can be clicked on to move the display to that location. About to
add buttons to add zstat/cluster mask overlays
---
fsl/data/strings.py | 5 +-
fsl/fslview/controls/clusterpanel.py | 107 ++++++++++++++++-----------
2 files changed, 69 insertions(+), 43 deletions(-)
diff --git a/fsl/data/strings.py b/fsl/data/strings.py
index dac954427..80165a32f 100644
--- a/fsl/data/strings.py
+++ b/fsl/data/strings.py
@@ -251,7 +251,10 @@ labels = TypeDict({
'ClusterPanel.zcogcoords' : 'Z Max COG location',
'ClusterPanel.copemax' : 'COPE Max',
'ClusterPanel.copemaxcoords' : 'COPE Max location',
- 'ClusterPanel.copemean' : 'COPE mean',
+ 'ClusterPanel.copemean' : 'COPE mean',
+
+ 'ClusterPanel.addZStats' : 'Add Z statistics',
+ 'ClusterPanel.addClusterMask' : 'Add cluster mask',
})
diff --git a/fsl/fslview/controls/clusterpanel.py b/fsl/fslview/controls/clusterpanel.py
index 770453fca..ab98ec474 100644
--- a/fsl/fslview/controls/clusterpanel.py
+++ b/fsl/fslview/controls/clusterpanel.py
@@ -7,9 +7,11 @@
import logging
import wx
-import wx.grid as wxgrid
+
+import pwidgets.widgetgrid as widgetgrid
import fsl.fslview.panel as fslpanel
+import fsl.utils.transform as transform
import fsl.data.strings as strings
import fsl.data.featimage as featimage
@@ -27,21 +29,31 @@ class ClusterPanel(fslpanel.FSLViewPanel):
style=(wx.ALIGN_CENTRE_HORIZONTAL |
wx.ALIGN_CENTRE_VERTICAL))
- self.__overlayName = wx .StaticText(self)
- self.__statSelect = wx .ComboBox( self, style=wx.CB_READONLY)
- self.__clusterList = wxgrid.Grid( self)
+ self.__overlayName = wx .StaticText( self)
+ self.__addZStats = wx.Button( self)
+ self.__addClusterMask = wx.Button( self)
+ self.__statSelect = wx .ComboBox( self,
+ style=wx.CB_READONLY)
+ self.__clusterList = widgetgrid.WidgetGrid(self)
+
+ self.__addZStats .SetLabel(strings.labels[self, 'addZStats'])
+ self.__addClusterMask.SetLabel(strings.labels[self, 'addClusterMask'])
- self.__clusterList.CreateGrid(0, 10)
- self.__clusterList.HideRowLabels()
+ self.__clusterList.ShowRowLabels(False)
+ self.__clusterList.ShowColLabels(True)
self.__sizer = wx.BoxSizer(wx.VERTICAL)
self.SetSizer(self.__sizer)
self.__topSizer = wx.BoxSizer(wx.HORIZONTAL)
self.__mainSizer = wx.BoxSizer(wx.VERTICAL)
+
+ args = {'flag' : wx.EXPAND, 'proportion' : 1}
- self.__topSizer.Add(self.__overlayName, flag=wx.EXPAND, proportion=1)
- self.__topSizer.Add(self.__statSelect, flag=wx.EXPAND, proportion=1)
+ self.__topSizer.Add(self.__overlayName, **args)
+ self.__topSizer.Add(self.__statSelect, **args)
+ self.__topSizer.Add(self.__addZStats, **args)
+ self.__topSizer.Add(self.__addClusterMask, **args)
self.__mainSizer.Add(self.__topSizer, flag=wx.EXPAND)
self.__mainSizer.Add(self.__clusterList, flag=wx.EXPAND, proportion=1)
@@ -174,43 +186,54 @@ class ClusterPanel(fslpanel.FSLViewPanel):
'copemaxcoords' : 8,
'copemean' : 9}
- grid = self.__clusterList
-
- nrows = grid.GetNumberRows()
+ grid = self.__clusterList
+ overlay = self.__selectedOverlay
+ opts = self._displayCtx.getOpts(overlay)
- if nrows > 0:
- grid.DeleteRows(0, nrows)
- grid.InsertRows(0, len(clusters))
+ grid.ClearGrid()
+ grid.SetGridSize(len(clusters), 10)
for col, i in cols.items():
- grid.SetColLabelValue(i, strings.labels[self, col])
+ grid.SetColLabel(i, strings.labels[self, col])
- for i, clust in enumerate(clusters):
- f = lambda v: '{}'.format(v)
- grid.SetCellValue(i, cols['index'], f(clust.index))
- grid.SetCellValue(i, cols['nvoxels'], f(clust.nvoxels))
- grid.SetCellValue(i, cols['p'], f(clust.p))
- grid.SetCellValue(i, cols['logp'], f(clust.logp))
- grid.SetCellValue(i, cols['zmax'], f(clust.zmax))
-
- grid.SetCellValue(i, cols['zmaxcoords'],
- '[{} {} {}]'.format(clust.zmaxx,
- clust.zmaxy,
- clust.zmaxz))
-
- grid.SetCellValue(i, cols['zcogcoords'],
- '[{} {} {}]'.format(clust.zcogx,
- clust.zcogy,
- clust.zcogz))
-
- grid.SetCellValue(i, cols['copemax'], f(clust.copemax))
-
- grid.SetCellValue(i, cols['copemaxcoords'],
- '[{} {} {}]'.format(clust.copemaxx,
- clust.copemaxy,
- clust.copemaxz))
+ def makeCoordButton(coords):
+
+ label = wx.StaticText(grid, label='[{} {} {}]'.format(*coords))
+ btn = wx.Button(grid, label=u'\u2192', style=wx.BU_EXACTFIT)
- grid.SetCellValue(i, cols['copemean'], f(clust.copemean))
+ sizer = wx.BoxSizer(wx.HORIZONTAL)
+ sizer.Add(label, flag=wx.EXPAND, proportion=1)
+ sizer.Add(btn)
+
+ def onClick(ev):
+ xfm = opts.getTransform('voxel', 'display')
+ dloc = transform.transform([coords], xfm)[0]
+ self._displayCtx.location = dloc
+
+ btn.Bind(wx.EVT_BUTTON, onClick)
+
+ return sizer
+
+ for i, clust in enumerate(clusters):
- grid.AutoSize()
- grid.Refresh()
+ zmaxbtn = makeCoordButton((clust.zmaxx,
+ clust.zmaxy,
+ clust.zmaxz))
+ zcogbtn = makeCoordButton((clust.zcogx,
+ clust.zcogy,
+ clust.zcogz))
+ copemaxbtn = makeCoordButton((clust.copemaxx,
+ clust.copemaxy,
+ clust.copemaxz))
+
+ fmt = lambda v: '{}'.format(v)
+ grid.SetText( i, cols['index'], fmt(clust.index))
+ grid.SetText( i, cols['nvoxels'], fmt(clust.nvoxels))
+ grid.SetText( i, cols['p'], fmt(clust.p))
+ grid.SetText( i, cols['logp'], fmt(clust.logp))
+ grid.SetText( i, cols['zmax'], fmt(clust.zmax))
+ grid.SetWidget(i, cols['zmaxcoords'], zmaxbtn)
+ grid.SetWidget(i, cols['zcogcoords'], zcogbtn)
+ grid.SetText( i, cols['copemax'], fmt(clust.copemax))
+ grid.SetWidget(i, cols['copemaxcoords'], copemaxbtn)
+ grid.SetText( i, cols['copemean'], fmt(clust.copemean))
--
GitLab