From e12285c476110dd45d60a6b065459a57bb08bd19 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 29 Mar 2019 12:43:20 +0000
Subject: [PATCH] TEST: Unit test fsl_anat wrapper
---
tests/test_wrappers.py | 15 +++++++++++++++
1 file changed, 15 insertions(+)
diff --git a/tests/test_wrappers.py b/tests/test_wrappers.py
index b1517b32c..fc0050a31 100644
--- a/tests/test_wrappers.py
+++ b/tests/test_wrappers.py
@@ -288,3 +288,18 @@ def test_fast():
expected = [cmd, '-v', '--out=myseg', '--class=3', 'in1', 'in2', 'in3']
assert result.output[0] == ' '.join(expected)
+
+
+
+def test_fsl_anat():
+ with asrt.disabled(), \
+ run.dryrun(), \
+ mockFSLDIR(bin=('fsl_anat',)) as fsldir:
+
+ cmd = op.join(fsldir, 'bin', 'fsl_anat')
+
+ result = fw.fsl_anat('t1', out='fsl_anat', bias_smoothing=25)
+ expected = [cmd, '-i', 't1', '-o', 'fsl_anat', '-t', 'T1',
+ '-s', '25']
+
+ assert result.output[0] == ' '.join(expected)
--
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