From e5811b42dc7de35ad0e5b5e36ab43dab6d9fbb3a Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Wed, 23 Jun 2021 14:48:45 +0100
Subject: [PATCH] TEST: adjust fast test
---
tests/test_wrappers/test_wrappers.py | 17 ++++++++++-------
1 file changed, 10 insertions(+), 7 deletions(-)
diff --git a/tests/test_wrappers/test_wrappers.py b/tests/test_wrappers/test_wrappers.py
index e93d494ea..d914d3671 100644
--- a/tests/test_wrappers/test_wrappers.py
+++ b/tests/test_wrappers/test_wrappers.py
@@ -327,13 +327,16 @@ def test_fast():
cmd = op.join(fsldir, 'bin', 'fast')
result = fw.fast('input', 'myseg', n_classes=3)
- expected = [cmd, '-v', '--out=myseg', '--class=3', 'input']
+ expected = [cmd, '--out=myseg', '--class=3', 'input']
assert result.stdout[0] == ' '.join(expected)
result = fw.fast(('in1', 'in2', 'in3'), 'myseg', n_classes=3)
- expected = [cmd, '-v', '--out=myseg', '--class=3', 'in1', 'in2', 'in3']
+ expected = [cmd, '--out=myseg', '--class=3', 'in1', 'in2', 'in3']
+ assert result.stdout[0] == ' '.join(expected)
+ result = fw.fast(('in1', 'in2', 'in3'), 'myseg', n_classes=3, verbose=True)
+ expected = [cmd, '--out=myseg', '--class=3', '--verbose', 'in1', 'in2', 'in3']
assert result.stdout[0] == ' '.join(expected)
@@ -390,10 +393,10 @@ def test_tbss():
def test_fsl_prepare_fieldmap():
with asrt.disabled(), run.dryrun(), mockFSLDIR(bin=('fsl_prepare_fieldmap',)) as fsldir:
fpf = op.join(fsldir, 'bin', 'fsl_prepare_fieldmap')
- result = fw.fsl_prepare_fieldmap(phase_image='ph',
- magnitude_image='mag',
- out_image='out',
- deltaTE=2.46,
- nocheck=True)
+ result = fw.fsl_prepare_fieldmap(phase_image='ph',
+ magnitude_image='mag',
+ out_image='out',
+ deltaTE=2.46,
+ nocheck=True)
expected = (fpf, ('SIEMENS', 'ph', 'mag', 'out', '2.46', '--nocheck'))
assert checkResult(result.stdout[0], *expected)
--
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