From eb4380774fa6197da6c0b4df2f560653aeb92132 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 3 May 2024 17:17:35 +0100
Subject: [PATCH] BF: Honour $FSLOUTPUTTYPE, otherwise output files saved by
FSL tools may not be detected
---
fsl/wrappers/wrapperutils.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/fsl/wrappers/wrapperutils.py b/fsl/wrappers/wrapperutils.py
index 0f9a1842..09871c10 100644
--- a/fsl/wrappers/wrapperutils.py
+++ b/fsl/wrappers/wrapperutils.py
@@ -1268,7 +1268,8 @@ def fileOrImage(*args, **kwargs):
return infile
def prepOut(workdir, name, val):
- return op.join(workdir, '{}.nii.gz'.format(name))
+ return op.join(workdir, f'{name}{fslimage.defaultExt()}')
+
def load(name, path):
--
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