From fb005c5d572981f2ed2ef9bd21663f666fc725c7 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 20 Aug 2021 12:52:48 +0100
Subject: [PATCH] TEST: adjust fsl.utils.run.run(.. submit=X) unit test
---
tests/test_run.py | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/tests/test_run.py b/tests/test_run.py
index 287ccd643..644fb6b38 100644
--- a/tests/test_run.py
+++ b/tests/test_run.py
@@ -268,7 +268,7 @@ def test_runfsl():
run.FSL_PREFIX = None
-def mock_submit(cmd, **kwargs):
+def mock_fsl_sub(cmd, **kwargs):
if isinstance(cmd, str):
name = cmd.split()[0]
else:
@@ -286,7 +286,7 @@ def mock_submit(cmd, **kwargs):
for k in sorted(kwargs.keys()):
f.write('{}: {}\n'.format(k, kwargs[k]))
- return jid
+ return (jid, '')
def test_run_submit():
@@ -304,7 +304,7 @@ def test_run_submit():
with tempdir.tempdir(), \
mockFSLDIR(), \
- mock.patch('fsl.utils.fslsub.submit', mock_submit):
+ mock.patch('fsl.wrappers.fsl_sub', mock_fsl_sub):
mkexec(op.expandvars('$FSLDIR/bin/fsltest'), test_script)
--
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