From fb10710f7852c6cc6d77f2c09f0fcbb1a16882d4 Mon Sep 17 00:00:00 2001
From: Martin Craig <martin.craig@eng.ox.ac.uk>
Date: Tue, 10 Jul 2018 10:08:54 +0100
Subject: [PATCH] Add kwargs to applyxfm wrapper - required for logging options
---
fsl/wrappers/flirt.py | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/fsl/wrappers/flirt.py b/fsl/wrappers/flirt.py
index dac853992..d4ff35311 100644
--- a/fsl/wrappers/flirt.py
+++ b/fsl/wrappers/flirt.py
@@ -59,14 +59,15 @@ def flirt(src, ref, **kwargs):
return cmd
-def applyxfm(src, ref, mat, out, interp='spline'):
+def applyxfm(src, ref, mat, out, interp='spline', **kwargs):
"""Convenience function which runs ``flirt -applyxfm ...``."""
return flirt(src,
ref,
out=out,
applyxfm=True,
init=mat,
- interp=interp)
+ interp=interp,
+ **kwargs)
@wutils.fileOrArray()
--
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