Commits · 12c92a6285f5cabd3e7b388dd94857f85a111028 · FSL / fslpy

17 Feb, 2021 1 commit
- CI: No longer test on 36 · 12c92a62
  Paul McCarthy authored Feb 17, 2021
  
  12c92a62
10 Feb, 2021 4 commits
- Merge branch 'enh/taskthread' into 'master' · b45d290c
  Paul McCarthy authored Feb 10, 2021
```
Enh/taskthread

See merge request fsl/fslpy!283
```
  b45d290c
- DOC: Changelog · ef0c4878
  Paul McCarthy authored Feb 10, 2021
  
  ef0c4878
- Test onError handler · 5a7a9b85
  Paul McCarthy authored Feb 10, 2021
  
  5a7a9b85
- ENH: TaskThread accepts an onError function which is called on idle loop if · 9b90641b
  Paul McCarthy authored Feb 10, 2021
```
queued task raises an error.
```
  9b90641b
08 Feb, 2021 6 commits
- Merge branch 'bf/cluster' into 'master' · 16056e41
  Paul McCarthy authored Feb 08, 2021
```
Bf/cluster

See merge request fsl/fslpy!281
```
  16056e41
- DOC: changelog · 7cc03ad2
  Paul McCarthy authored Feb 08, 2021
  
  7cc03ad2
- TEST: Test that loadClusterResults loads correct values · 0e835e7c
  Paul McCarthy authored Feb 08, 2021
  
  0e835e7c
- RF: Don't round voxel coords - COG coordinates are not integer · 947b7693
  Paul McCarthy authored Feb 08, 2021
  
  947b7693
- STY: whitespace · e92f2cb0
  Paul McCarthy authored Feb 08, 2021
  
  e92f2cb0
- BF: Typo - copemax was being overridden with first voxel coordinate · d0be230e
  Paul McCarthy authored Feb 08, 2021
  
  d0be230e
29 Jan, 2021 6 commits
- Merge branch 'rf/docfix' into 'master' · d7fb61b6
  Paul McCarthy authored Jan 29, 2021
```
Rf/docfix

See merge request fsl/fslpy!279
```
  d7fb61b6
- DOC: Changelog · 6bf9cf50
  Paul McCarthy authored Jan 29, 2021
  
  6bf9cf50
- MNT: Mock out six during doc generation · 63bdcfe1
  Paul McCarthy authored Jan 29, 2021
  
  63bdcfe1
- DOC: Address sphinx warnings · 82997da0
  Paul McCarthy authored Jan 29, 2021
  
  82997da0
- RF: SeriesDescription may not be present in dmc2niix json output · 015c0dce
  Paul McCarthy authored Jan 29, 2021
  
  015c0dce
- TEST: Missed one dcm2niix change · 43c56c63
  Paul McCarthy authored Jan 29, 2021
  
  43c56c63
21 Jan, 2021 6 commits
- Merge branch 'test/dicom' into 'master' · 38a40735
  Paul McCarthy authored Jan 21, 2021
```
Test/dicom

See merge request fsl/fslpy!277
```
  38a40735
- DOC: changelog · 3559a0f8
  Paul McCarthy authored Jan 21, 2021
  
  3559a0f8
- RF: minor formatting · d316b293
  Paul McCarthy authored Jan 21, 2021
  
  d316b293
- TEST: Additional potential dcm2niix output · 9e2f40fa
  Paul McCarthy authored Jan 21, 2021
  
  9e2f40fa
- Merge branch 'evan-patch' into 'master' · a6f30843
  Paul McCarthy authored Jan 21, 2021
```
ENH: add function to load settings from arbitrary fsf

See merge request fsl/fslpy!276
```
  a6f30843
- ENH: add function to load settings from arbitrary fsf · 673a206d
  Evan Edmond authored Jan 21, 2021
  
  673a206d
20 Jan, 2021 2 commits
- Merge branch 'doc/changelog' into 'master' · 8c7adadc
  Paul McCarthy authored Jan 20, 2021
```
DOC: Fix date [skip ci]

See merge request fsl/fslpy!274
```
  8c7adadc
- DOC: Fix date [skip ci] · 797159e2
  Paul McCarthy authored Jan 20, 2021
  
  797159e2
19 Jan, 2021 7 commits
- Merge branch 'rf/wsl-popen' into 'master' · 73fb2827
  Paul McCarthy authored Jan 19, 2021
```
Adjust fsl.utils.run.run to workaround Windows issue

See merge request fsl/fslpy!272
```
  73fb2827
- MNT: Pre-minor-release-version-bump [skip ci] · 1524145f
  Paul McCarthy authored Jan 19, 2021
  
  1524145f
- DOC: Various small updates, aim to release tonight · 3fd32ad2
  Paul McCarthy authored Jan 19, 2021
  
  3fd32ad2
- CI: Test against py39 · d9a253cb
  Paul McCarthy authored Jan 19, 2021
  
  d9a253cb
- TEST: Work around dcm2niix weirdnesses - an older version appears to have gone · ea332776
  Paul McCarthy authored Jan 19, 2021
```
missing from github, even older versions produce different numbers of series
from a dicom dir, and different numbers of images from a series, and the
newest version produces carets instead of underscores.
```
  ea332776
- DOC: Changelog [skip ci] · 71e42204
  Paul McCarthy authored Jan 19, 2021
  
  71e42204
- Modify Popen call under WSL to prevent opening of a console window · 10dd3f99
  Martin Craig authored Jan 19, 2021
```
Without this any FSL call under Windows opens potentially multiple
transient console windows which is distracting and slows down
performance
```
  10dd3f99
07 Dec, 2020 2 commits
- Merge branch 'evan-patch-smooth' into 'master' · 57348825
  Paul McCarthy authored Dec 07, 2020
```
ENH: add fslmaths simple smoothing

See merge request fsl/fslpy!271
```
  57348825
- ENH: add fslmaths simple smoothing · 75ed6335
  Evan Edmond authored Dec 07, 2020 and Paul McCarthy committed Dec 07, 2020
  
  75ed6335
26 Nov, 2020 4 commits
- Merge branch 'evan-doc-filetree' into 'master' · 990f1d94
  Paul McCarthy authored Nov 26, 2020
```
DOC: filetree docs [skip-ci]

See merge request fsl/fslpy!267
```
  990f1d94
- Apply 1 suggestion(s) to 1 file(s) · e942729c
  Evan Edmond authored Nov 26, 2020
  
  e942729c
- Update __init__.py · 5e7f6f37
  Evan Edmond authored Nov 26, 2020
  
  5e7f6f37
- DOC: filetree docs [skip-ci] · 967cc62e
  Evan Edmond authored Nov 26, 2020
  
  967cc62e
25 Nov, 2020 2 commits
- Merge branch 'evan-patch-fmap' into 'master' · 9db1e57e
  Paul McCarthy authored Nov 25, 2020
```
ENH: wrapper and test for fsl_prepare_fieldmap

See merge request fsl/fslpy!265
```
  9db1e57e
- Merge branch 'evan-patch-filetree-2' into 'master' · 3cf668d1
  Paul McCarthy authored Nov 25, 2020
```
ENH: add .tree file for fsl_anat

See merge request fsl/fslpy!264
```
  3cf668d1