Commits · 3f4bbb1a7a9c1b3aec090635eeac1f0521b06c00 · FSL / fslpy

20 Oct, 2020 1 commit
- Merge branch 'mnt/v3.3/recover' into 'v3.3' · 3f4bbb1a
  Paul McCarthy authored Oct 20, 2020
```
Mnt/v3.3/recover

See merge request fsl/fslpy!259
```
  3f4bbb1a
14 Oct, 2020 5 commits
- Merge branch 'rel/3.3.3' into 'v3.3' · cbeca106
  Paul McCarthy authored Oct 14, 2020
```
Rel/3.3.3

See merge request fsl/fslpy!260
```
  cbeca106
- MNT: version · 0941fd5f
  Paul McCarthy authored Oct 14, 2020
  
  0941fd5f
- TEST: Missed assert; make sure fileorthing handles cmdonly, and cmdonly works · a76c4ec0
  Paul McCarthy authored Oct 13, 2020
```
when combining fileorthing and cmdwrapper
```
  a76c4ec0
- DOC: changelog · dbface2a
  Paul McCarthy authored Oct 13, 2020
  
  dbface2a
- RF: FileOrThing passes through if cmdonly=True · 06f060a3
  Paul McCarthy authored Oct 13, 2020
  
  06f060a3
12 Oct, 2020 6 commits
- Merge branch 'rel/3.3.2' into 'v3.3' · 17ffd5f8
  Paul McCarthy authored Oct 12, 2020
```
Rel/3.3.2

See merge request fsl/fslpy!258
```
  17ffd5f8
- MNT: version · 742f56dc
  Paul McCarthy authored Oct 12, 2020
  
  742f56dc
- TEST: Test cmdonly handling · 16323aae
  Paul McCarthy authored Oct 12, 2020
  
  16323aae
- RF: Implement cmdonly in run.run, rather than in wrappers, so e.g. $FSLDIR is · edd779d9
  Paul McCarthy authored Oct 12, 2020
```
correctly prepended.
```
  edd779d9
- DOC: changelog · e97b8984
  Paul McCarthy authored Oct 12, 2020
  
  e97b8984
- ENH: cmdwrapper/fslwrapper-wrapped functions accept a 'cmdonly' argument, which · d73a4cc4
  Paul McCarthy authored Oct 12, 2020
```
gives access to the generated command, instead of it being run
```
  d73a4cc4
08 Oct, 2020 7 commits
- Merge branch 'rel/3.3.1' into 'v3.3' · 3d4a345d
  Paul McCarthy authored Oct 08, 2020
```
Rel/3.3.1

See merge request fsl/fslpy!256
```
  3d4a345d
- MNT: version · 82b90ca4
  Paul McCarthy authored Oct 08, 2020
  
  82b90ca4
- TEST: adjust [de]compose test · 20acee4d
  Paul McCarthy authored Oct 08, 2020
  
  20acee4d
- DOC: changelog · aa112949
  Paul McCarthy authored Oct 08, 2020
  
  aa112949
- TEST: Add test case with shear component · a44c25dd
  Paul McCarthy authored Oct 08, 2020
  
  a44c25dd
- ENH: decompose function has option to return shears, and compose function · f339b54d
  Paul McCarthy authored Oct 08, 2020
```
accepts shears
```
  f339b54d
- BF: Missing normalisation step in decompose · c2bf208e
  Paul McCarthy authored Oct 08, 2020
  
  c2bf208e
22 Sep, 2020 8 commits
- Merge branch 'rel/3.3.0' into 'v3.3' · 09c4e379
  Paul McCarthy authored Sep 22, 2020
```
MNT: version

See merge request fsl/fslpy!254
```
  09c4e379
- MNT: version · a6c58f66
  Paul McCarthy authored Sep 22, 2020
  
  a6c58f66
- Merge branch 'mnt/version' into 'master' · 86c0fdb0
  Paul McCarthy authored Sep 22, 2020
```
MNT: bump version

See merge request fsl/fslpy!253
```
  86c0fdb0
- MNT: bump version · 1704b2f2
  Paul McCarthy authored Sep 22, 2020
  
  1704b2f2
- Merge branch 'bf/coefficient_field' into 'master' · dfb45639
  Paul McCarthy authored Sep 22, 2020
```
Bf/coefficient field

See merge request fsl/fslpy!252
```
  dfb45639
- DOC: changelog · e8eb9a49
  Paul McCarthy authored Sep 22, 2020
  
  e8eb9a49
- TEST: Test force warp field intent code · 03ba3546
  Paul McCarthy authored Sep 22, 2020
  
  03ba3546
- RF: readFnirt function allows field type to be specified in case file has no · 98a8d42c
  Paul McCarthy authored Sep 22, 2020
```
intent code set
```
  98a8d42c
21 Sep, 2020 4 commits
- DOC: Changelog · 79fd9598
  Paul McCarthy authored Sep 21, 2020
  
  79fd9598
- TEST: Regression test, check coefficient field works with alt ref · b62cfa88
  Paul McCarthy authored Sep 21, 2020
  
  b62cfa88
- RF: Cosmetic linting · f1fbcb32
  Paul McCarthy authored Sep 21, 2020
  
  f1fbcb32
- BF: Adjust fieldToRefMat in case the provided reference image has · dc5eadb2
  Paul McCarthy authored Sep 21, 2020
```
different dimensions than the original reference image
```
  dc5eadb2
18 Aug, 2020 3 commits
- Merge branch 'doc/changelog' into 'master' · be82aa76
  Paul McCarthy authored Aug 18, 2020
```
DOC: changelog [skip ci]

See merge request fsl/fslpy!251
```
  be82aa76
- DOC: changelog [skip ci] · 6d63d8df
  Paul McCarthy authored Aug 18, 2020
  
  6d63d8df
- Merge branch 'bids_update' into 'master' · aeded94e
  Paul McCarthy authored Aug 18, 2020
```
Bids update

See merge request fsl/fslpy!250
```
  aeded94e
17 Aug, 2020 2 commits
- BUG: fix the echo label · b77f4a13
  Michiel Cottaar authored Aug 17, 2020
  
  b77f4a13
- updated raw BIDS tree · cdffa439
  Michiel Cottaar authored Aug 17, 2020
  
  cdffa439
23 Jul, 2020 2 commits
- Merge branch 'gps_wrapper' into 'master' · 3cfb4211
  Paul McCarthy authored Jul 23, 2020
```
ENH: add wrapper for gps

See merge request fsl/fslpy!249
```
  3cfb4211
- ENH: add wrapper for gps · c24578f7
  Michiel Cottaar authored Jul 23, 2020
  
  c24578f7
21 Jul, 2020 2 commits
- Merge branch 'doc/updates' into 'master' · 67e0190a
  Paul McCarthy authored Jul 21, 2020
```
DOC: add new modules [skip ci]

See merge request fsl/fslpy!248
```
  67e0190a
- DOC: add new modules [skip ci] · 6fa6c622
  Paul McCarthy authored Jul 21, 2020
  
  6fa6c622