Commits · faacc3e67a4ddcaa16f56336f10b5e0c6b1647bb · FSL / fslpy

29 Jan, 2018 9 commits
- Minor whitespace adjustments · faacc3e6
  Paul McCarthy authored Jan 29, 2018
  
  faacc3e6
- Merge branch 'master' into 'master' · f86fe01c
  Paul McCarthy authored Jan 29, 2018
```
Auto install links to scripts

See merge request fsl/fslpy!42
```
  f86fe01c
- Added docstring · a3d9749e
  Matthew Webster authored Jan 29, 2018
  
  a3d9749e
- Create atlasquery ohi wrapper · 9d110f2d
  Matthew Webster authored Jan 29, 2018
  
  9d110f2d
- Create atlasquery ohi wrapper · 586d7d44
  Matthew Webster authored Jan 29, 2018
  
  586d7d44
- Auto install links to scripts, typo · 8764a649
  Matthew Webster authored Jan 29, 2018
  
  8764a649
- Auto install links to scripts · a39249a5
  Matthew Webster authored Jan 29, 2018
  
  a39249a5
- Post-release version bump · 294c324a
  Paul McCarthy authored Jan 29, 2018
  
  294c324a
- changelog · 666e63a5
  Paul McCarthy authored Jan 29, 2018
  
  666e63a5
26 Jan, 2018 3 commits
- trimesh should now work without lxml · f2aff8ab
  Paul McCarthy authored Jan 26, 2018
  
  f2aff8ab
- Changelog · ee06fb2a
  Paul McCarthy authored Jan 26, 2018
  
  ee06fb2a
- Scipy 1.* for conda · 934191b0
  Paul McCarthy authored Jan 26, 2018
  
  934191b0
25 Jan, 2018 4 commits
- Scipy 1.* · f2deb89a
  Paul McCarthy authored Jan 25, 2018
  
  f2deb89a
- remove debug from test · cc4378d2
  Paul McCarthy authored Jan 25, 2018
  
  cc4378d2
- Comment on annot colour table access method. · c9033bad
  Paul McCarthy authored Jan 25, 2018
  
  c9033bad
- Disable freesurfer .annot test on current version of nibabel, because it is · e2083352
  Paul McCarthy authored Jan 25, 2018
```
broken.
```
  e2083352
24 Jan, 2018 4 commits
- changelog · de73eb91
  Paul McCarthy authored Jan 24, 2018
  
  de73eb91
- Fix to freesurfer.findReferenceImage · b683e85c
  Paul McCarthy authored Jan 24, 2018
  
  b683e85c
- Unit tests for freesurfer module · fdea6f0b
  Paul McCarthy authored Jan 24, 2018
  
  fdea6f0b
- MGH files tested separately · 87294e3d
  Paul McCarthy authored Jan 24, 2018
  
  87294e3d
23 Jan, 2018 7 commits
- Updated mesh tests. · 82285e88
  Paul McCarthy authored Jan 23, 2018
  
  82285e88
- Mesh calculates nvertices in init. Mesh load/add vertices/vertexData methods · 075910d3
  Paul McCarthy authored Jan 23, 2018
```
check data shape, and raise if bad.
```
  075910d3
- Freesurfer checks label and stats directories for vertex data · 66eb47f4
  Paul McCarthy authored Jan 23, 2018
```
files. Adjustment to gifti.relatedFiles.
```
  66eb47f4
- Change MGHImage default name · f8a52e27
  Paul McCarthy authored Jan 23, 2018
  
  f8a52e27
- Enhancements to freesurfer module to support different vertex data types. · 778f71bd
  Paul McCarthy authored Jan 23, 2018
  
  778f71bd
- Trimesh doesn't need to be memoized anymore - internal vertex set cache is · 7f0385d0
  Paul McCarthy authored Jan 23, 2018
```
used
```
  7f0385d0
- New Mesh.loadVertices method. Mesh.vertices only raises a notification if · 0467986e
  Paul McCarthy authored Jan 23, 2018
```
the vertex set changes.
```
  0467986e
21 Jan, 2018 13 commits
- Adjusted gifti.relatedFiles function - now accepts suffixes · 211858f3
  Paul McCarthy authored Jan 21, 2018
  
  211858f3
- Changelog · 28787feb
  Paul McCarthy authored Jan 21, 2018
  
  28787feb
- Additions to freesurfer module - can now load vertex data. · 0431b85c
  Paul McCarthy authored Jan 21, 2018
  
  0431b85c
- Mesh class does not need deprecated getBounds method · 28cde67e
  Paul McCarthy authored Jan 21, 2018
  
  28cde67e
- New method vertexDataSets, to retrieve list of all loaded vertex data sets. · 5f976745
  Paul McCarthy authored Jan 21, 2018
  
  5f976745
- Duh, Mesh.init(fixWinding) was not being passed through. Use absolute data · af574f26
  Paul McCarthy authored Jan 21, 2018
```
file path for vertex data key.
```
  af574f26
- Adjust freesurer/gifti file extensions · 78b22de4
  Paul McCarthy authored Jan 21, 2018
  
  78b22de4
- What do you know, that silly test caught a bug · 8d606bb2
  Paul McCarthy authored Jan 21, 2018
  
  8d606bb2
- Silly test for silly function · 6797bffe
  Paul McCarthy authored Jan 21, 2018
  
  6797bffe
- New silly function in path module · 3546ed03
  Paul McCarthy authored Jan 21, 2018
  
  3546ed03
- mgh unit test adjust · e20b6bda
  Paul McCarthy authored Jan 21, 2018
  
  e20b6bda
- looksLikeMGHImage is not a very useful function. · cd8ba60e
  Paul McCarthy authored Jan 21, 2018
  
  cd8ba60e
- Fleshed out freesurfer module a bit. · 78c7a59a
  Paul McCarthy authored Jan 21, 2018
  
  78c7a59a