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Commit 10d8eea4 authored by Paul McCarthy's avatar Paul McCarthy 🚵
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RF: Updates to FMRIB categories

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funpack/configs/fmrib/categories.tsv
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......@@ -2,7 +2,7 @@ ID Category Variables
1 age, sex, brain MRI protocol, Phase 31,34,21022,22200,25780
2 genetics 21000,22000:22125,22201:22325,22182,22800:22823
3 early life factors 52,129,130,1677,1687,1697,1737,1767,1777,1787,21066,20022
10 lifestyle and environment - general 3:6,132,189,670,680,699,709,728,738,767,777,1031,1797,1807,1835,1845,1873,1883,2139,2149,2159,2237,2375,2385,2395,2405,2267,2277,2714:10:2834,2946,3526,3536,3546,3581,3591,3659,3669,3700,3710,3720,3829,3839,3849,3872,3882,3912,3942,3972,3982,4501,4674,4825,4836,5057,6138,6142,6139:6141,6145:6146,6160,10016,10105,10114,10721,10722,10740,10749,10860,10877,10886,20074:20075,20110:20113,20118:20119,20121,22501,22599,22606,22700,22702,22704,24003:24019,24024,24500:24508,26410:26434
10 lifestyle and environment - general 3:6,132,189,670,680,699,709,728,738,767,777,1031,1797,1807,1835,1845,1873,1883,2139,2149,2159,2237,2375,2385,2395,2405,2267,2277,2714:10:2834,2946,3526,3536,3546,3581,3591,3659,3669,3700,3710,3720,3829,3839,3849,3872,3882,3912,3942,3972,3982,4501,4674,4825,4836,5057,6138,6142,6139:6141,6145:6146,6160,10016,10105,10114,10721,10722,10740,10749,10860,10877,10886,20074:20075,20110:20113,20118:20119,20121,22501,22599,22606,22700,22702,22704,24003:24020,24024,24500:24508,26410:26434
11 lifestyle and environment - exercise and work 1001,1011,796,806,816,826,845,864,874,884,894,904,914,924,943,971,981,991,1021,1050:10:1220,2624,2634,3426,3637,3647,6143,6162,6164,10953,10962,10971,22604,22605,22607:22615,22620,22630,22631,22640:22655,104900,104910,104920
12 lifestyle and environment - food and drink 1289:10:1389,1408:10:1548,2654,3089,3680,6144,10007,10723,10767,10776,10855,10912,20084:20094,20098:20109,100001:100009,100011:100019,100021:100025,100010:10:100560,100760:10:104670
13 lifestyle and environment - alcohol 1558:10:1628,2664,3731,3859,4407,4418,4429,4440,4451,4462,5364,10818,20095:20097,20117,20403:20410,20414:20416,100580:10:100740
......@@ -11,15 +11,15 @@ ID Category Variables
21 physical measures - bone density and sizes 77,78,3083:3086,3143:3144,3146:3148,4092,4095,4100:4101,4103:4106,4119:4120,4122:4125,4138:4147,23200:23243,23290:23320
22 physical measures - cardiac & blood vessels 93:95,102,4079,4080,4136,4194:4196,4198:4200,4204:4205,4207,5983,5984,5986,5992,5993,6014:6017,6019,6020,6022,6024,6032:6034,6038,6039,12673:12687,12336,12338,12340,12697,12698,12702,21021,22330:22338,22420:22426,22670:22685
23 hearing test 4229:4230,4232:4237,4239:4247,4249,4268:4270,4272,4275:4277,4279,4849,10793,20019,20021,20060
24 eye test 5076:5079,5082:5091,5096:5119,5132:5136,5138:5149,5152,5155:5164,5181:5183,5186,5188,5190,5193,5198:5199,5201,5202,5204,5206,5208,5209,5211,5215,5221,5237,5251,5254:5259,5262:5267,5274,5276,5292,5306,5324:5328,6070:6075,20052,20055,20261:20262
24 eye test 5076:5079,5082:5091,5096:5119,5132:5136,5138:5149,5152,5155:5164,5181:5183,5186,5188,5190,5193,5198:5199,5201,5202,5204,5206,5208,5209,5211,5215,5221,5237,5251,5254:5259,5261:5267,5273,5274,5276,5292,5306,5324:5328,6070:6075,20052,20055,20261:20262
25 physical activity measures 5985,90002:90003,90010:90013,90015:90177,90179:90195
26 abdominal measures 22415:22416
30 blood assays 74,23000:23044,23049:23060,23062,23063,23065:23071,23073:23075,30000:10:30300,30104,30112,30114,30172,30174,30242,30252,30254,30314:10:30344,30364:10:30424,30500:10:30530,30600:10:30890
31 brain IDPs 25000:25746,25754:25759,25761:25768,25781:25920,26500:26508:26513,26517:26518,26520:26552,26554:26720,26722:26723,26725:26727,26732,26734:26740,26743,26746:26750,26752,26754:26757,26759:26761,26763,26766,26768:26769,26771,26773:26774,26777,26780,26781:26782,26784,26786,26788:26790,26792:26796,26799,26801:26807,26810,26813:26819,26821:26824,26826:26827,26833,26835:26837,26839:26841,26844,26847:26851,26853:26857,26860:26862,26864,26867,26869:26870,26873:26875,26878,26881:26883,26885,26887,26889:26891,26893:26895,26897,26900,26902:26908,26911,26914:27772
32 cognitive phenotypes 62,111,396:404,630,4250:4256,4258:4260,4281:4283,4285,4287,4290:4292,4294,4924,4935,4957,4968,4979,4990,5001,5012,5556,5699,5779,5790,5866,6312,6332,6333,6348:6351,6362,6373,6374,6382,6383,6671,6770:6773,10133:10134,10136:10144,10146:10147,10241,10609:10610,10612,20016,20018,20023,20082,20128:20157,20159,20165,20167,20169:2:20195,20196:2:20200,20229,20230,20240,20242,20244:20248,23321:23324
50 health and medical history, health outcomes 84,87,92,134:137,2178,2188,2207,2217,2227,2247,2257,2296,2316,2335:10:2365,2415,2443:10:2473,2492,2674,2684,2694,2704,2844,2956:10:2986,3005,3079,3140,3393,3404,3414,3571,3606,3616,3627,3741,3751,3761,3773,3786,3799,3809,3894,3992,4012,4022,4041,4056,4067,4689,4700,4717,4728,4792,4803,4814,5408,5419,5430,5441,5452,5463,5474,5485,5496,5507,5518,5529,5540,5610,5832,5843,5855,5877,5890,5901,5912,5923,5934,5945,6119,6147,6148,6149,6150,6151,6152,6153,6154,6155,6159,6177,6179,6205,10004:10006,10854,20001:20011,20199,21024:21045,21047:21061,21064:21065,21067,21068,21070:21076,22126:22181,22502:22505,22616,22618,22619,40001:41253,41256,41258,41266,41267,41269,41271,41273,41275,41276,41277,41278,41284,41285,41286,42000:42013
31 brain IDPs 25000:25746,25754:25759,25761:25768,25781:25920,26500:26514,26517:26518,26520:27772
32 cognitive phenotypes 62,111,396:404,630,4250:4256,4258:4260,4281:4283,4285,4287,4290:4292,4294,4924,4935,4957,4968,4979,4990,5001,5012,5556,5699,5779,5790,5866,6312,6332,6333,6348:6351,6362,6373,6374,6382,6383,6671,6770:6773,10133:10134,10136:10144,10146:10147,10241,10609:10610,10612,20016,20018,20023,20082,20128:20157,20159,20165,20167,20169:2:20195,20196:2:20200,20229,20230,20240,20242,20244:20248,21004,23321:23324
50 health and medical history, health outcomes 84,87,92,134:137,2178,2188,2207,2217,2227,2247,2257,2296,2316,2335:10:2365,2415,2443:10:2473,2492,2674,2684,2694,2704,2844,2956:10:2986,3005,3079,3140,3393,3404,3414,3571,3606,3616,3627,3741,3751,3761,3773,3786,3799,3809,3894,3992,4012,4022,4041,4056,4067,4689,4700,4717,4728,4792,4803,4814,5408,5419,5430,5441,5452,5463,5474,5485,5496,5507,5518,5529,5540,5610,5832,5843,5855,5877,5890,5901,5912,5923,5934,5945,6119,6147,6148,6149,6150,6151,6152,6153,6154,6155,6159,6177,6179,6205,10004:10006,10854,20001:20011,20199,21024:21045,21047:21061,21064:21065,21067,21068,21070:21076,22126:22181,22502:22505,22616,22618,22619,40001:41253,41256,41258,41266,41267,41269:41273,41275:41278,41284:41286,42000:42013
51 mental health self-report 1920:10:2110,4526,4537,4548,4559,4570,4581,4598,4609,4620,4631,4642,4653,5375,5386,5663,5674,6156,20122,20126:20127,20401,20411,20417:20423,20425:20429,20431:20442,20445:20450,20453:20460,20463,20465:20467,20470:20471,20473,20476,20477,20479:20484,20485:20502,20505:20544,20546:20551,20553:20554,21062:21063
60 health dates 41257,41260,41262,41263,41268,41280:41283,42014,42016,130004,130008,130014:2:130020,130062,130064,130070,130082,130106,130134,130174:2:130178,130184:2:130190,130194,130202,130216,130218,130224:2:130230,130264,130310,130320,130336,130338,130342,130344,130622,130624,130648,130656:2:130660,130664,130670,130686,130696:2:130708,130714,130718,130722,130726,130734,130736,130770,130774,130792,130814,130818,130820,130826,130828,130832,130854,130868,130892:2:130898,130902:2:130910,130914,130918,130922,130924,130998,131000,131022,131030,131032,131042,131046,131048,131052:2:131056,131060:2:131064,131070:2:131076,131086,131102,131114,131124,131128:2:131132,131136,131138,131142,131144,131148,131150,131154,131158,131164,131166,131178:2:131186,131190,131192,131198,131204,131208:2:131212,131216,131222,131224,131228,131230,131234,131236,131242,131252,131256:2:131264,131270,131282,131286,131296,131298,131304:2:131308,131314,131316,131322,131324,131338,131342,131344,131348:2:131356,131360,131366:2:131370,131374,131382,131386,131390,131392,131396,131402,131404,131408,131410,131414,131416,131424:2:131432,131436,131442,131456,131458,131462:2:131476,131480:2:131484,131490:2:131494,131498,131528,131534,131538,131540,131546,131548,131554,131556,131560:2:131586,131590:2:131594,131598:2:131604,131608,131612:2:131620,131624:2:131654,131666:2:131670,131674:2:131684,131688,131692,131698:2:131708,131720,131722,131726,131730,131734:2:131742,131746,131748,131754,131760,131768,131774,131778,131782,131790:2:131798,131802:2:131806,131810,131812,131822:131826,131830,131836,131850,131852,131858,131864,131868:2:131888,131892,131900,131906,131910:2:131914,131916,131918,131922:2:131928,131934,131938:2:131942,131946:2:131950,131954:2:131964,131970:2:131974,131980,131988:2:131992,132002,132008,132016,132020,132022,132030:2:132038,132042,132050,132054:2:132058,132062:2:132066,132070:2:132078,132082:2:132088,132092,132096:2:132106,132110,132112,132116,132118,132122,132124,132128:2:132152,132156,132160,132162,132166:2:132170,132186,132192,132194,132202,132206,132212,132216,132220,132224,132230,132238:2:132244,132250,132252,132260:2:132264,132268,132274:2:132280,132298,132522,132532,132542,132562,132574,132312
70 health sources 42015,42017,130005,130009,130015:2:130019,130063,130065,130071,130083,130107,130135,130175:130179,130185:2:130191,130195,130203,130217,130219,130225,130231,130265,130311,130337,130343,130345,130623,130625,130649,130657:2:130661,130665,130671,130687,130697:2:130709,130715,130719,130723,130727,130735,130737,130771,130775,130793,130815,130819,130821,130827,130829,130833,130855,130869,130893:2:130899,130903:2:130911,130915,130919,130923,130925,130999,131001,131023,131031,131033,131043,131047,131049,131053,131055,131057,131061,131063,131065,131071:2:131077,131087,131103,131115,131125,131129,131131,131133,131137,131139,131145,131149,131151,131155,131159,131165,131167,131179:2:131187,131191,131193,131199,131205,131209,131211,131213,131217,131223,131225,131229,131231,131237,131243,131253,131257:2:131265,131271,131283,131287,131297,131299,131305,131307,131309,131315,131317,131323,131325,131339,131343,131345,131349:131357,131361,131367:131371,131375,131383,131387,131391,131393,131397,131403,131409,131411,131415,131417,131425:2:131433,131437,131443,131457,131459,131463:2:131477,131481,131483,131485,131491:2:131495,131499,131529,131535,131539,131541,131547,131549,131555,131557,131561,131563,131565:2:131587,131591,131593,131595,131599:2:131605,131609,131613:2:131621,131625:2:131655,131667:2:131671,131675:2:131685,131689,131693,131701:2:131709,131727,131731,131735:2:131743,131747,131749,131755,131761,131769,131775,131779,131783,131793,131795,131797,131803,131805,131807,131811,131813,131823,131825,131827,131831,131837,131851,131859,131865,131869:2:131889,131893,131901,131907,131911,131913:2:131919,131923:2:131929,131935,131939,131941,131943,131947,131949,131951,131955:2:131965,131971,131973,131975,131981,131989,131991,131993,132003,132009,132017,132021,132023,132031:2:132039,132043,132051,132055,132057,132059,132063:2:132067,132071:2:132079,132083:2:132089,132093,132097:2:132107,132111,132113,132117,132119,132123,132125,132129:2:132153,132157,132161,132163,132167,132169,132171,132187,132193,132195,132203,132207,132213,132217,132221,132225,132245,132265,132269,132275:2:132281,132299,132523,132533,132543,132563,132575,132313
60 health dates 41257,41260,41262,41263,41268,41280:41283,42014,42016,130004,130008,130014:2:130020,130062,130064,130070,130082,130106,130134,130174:2:130178,130184:2:130190,130194,130202,130216,130218,130224:2:130230,130264,130310,130320,130336,130338,130342,130344,130622,130624,130648,130656:2:130660,130664,130670,130686,130696:2:130708,130714,130718,130722,130726,130734,130736,130770,130774,130792,130814,130818,130820,130826,130828,130832,130854,130868,130892:2:130898,130902:2:130910,130914,130918,130922,130924,130998,131000,131022,131030,131032,131042,131046,131048,131052:2:131056,131060:2:131064,131070:2:131076,131086,131102,131114,131118,131124,131128:2:131132,131136,131138,131142,131144,131148,131150,131154,131158,131164,131166,131178:2:131186,131190,131192,131196,131198,131204,131208:2:131212,131216,131222,131224,131228,131230,131234,131236,131242,131252,131256:2:131264,131270,131282,131286,131296,131298,131304:2:131308,131314,131316,131322,131324,131338,131342,131344,131348:2:131356,131360,131366:2:131370,131374,131382,131386,131390,131392,131396,131402,131404,131408,131410,131414,131416,131424:2:131432,131436,131442,131456,131458,131462:2:131476,131480:2:131484,131490:2:131494,131498,131528,131534,131538,131540,131546,131548,131554,131556,131560:2:131586,131590:2:131594,131598:2:131604,131608,131612:2:131620,131624:2:131654,131666:2:131670,131674:2:131684,131688,131692,131698:2:131708,131720,131722,131726,131730,131734:2:131742,131746,131748,131754,131760,131768,131774,131778,131782,131790:2:131798,131802:2:131806,131810,131812,131822:131826,131830,131836,131850,131852,131858,131864,131868:2:131888,131892,131894,131900,131906,131910:2:131914,131916,131918,131922:2:131928,131934,131938:2:131942,131946:2:131950,131954:2:131964,131970:2:131974,131980,131988:2:131992,132002,132008,132016,132020,132022,132030:2:132038,132042,132050,132054:2:132058,132062:2:132066,132070:2:132078,132082:2:132088,132092,132096:2:132106,132110,132112,132116,132118,132122,132124,132128:2:132152,132156,132160:2:132170,132186,132192,132194,132202,132206,132212,132216,132220,132224,132230,132238:2:132244,132250,132252,132260:2:132264,132268,132274:2:132280,132298,132522,132532,132542,132562,132574,132312
70 health sources 42015,42017,130005,130009,130015:2:130019,130063,130065,130071,130083,130107,130135,130175:130179,130185:2:130191,130195,130203,130217,130219,130225,130231,130265,130311,130337,130343,130345,130623,130625,130649,130657:2:130661,130665,130671,130687,130697:2:130709,130715,130719,130723,130727,130735,130737,130771,130775,130793,130815,130819,130821,130827,130829,130833,130855,130869,130893:2:130899,130903:2:130911,130915,130919,130923,130925,130999,131001,131023,131031,131033,131043,131047,131049,131053,131055,131057,131061,131063,131065,131071:2:131077,131087,131103,131115,131119,131125,131129,131131,131133,131137,131139,131145,131149,131151,131155,131159,131165,131167,131179:2:131187,131191,131193,131197,131199,131205,131209,131211,131213,131217,131223,131225,131229,131231,131237,131243,131253,131257:2:131265,131271,131283,131287,131297,131299,131305,131307,131309,131315,131317,131323,131325,131339,131343,131345,131349:131357,131361,131367:131371,131375,131383,131387,131391,131393,131397,131403,131409,131411,131415,131417,131425:2:131433,131437,131443,131457,131459,131463:2:131477,131481,131483,131485,131491:2:131495,131499,131529,131535,131539,131541,131547,131549,131555,131557,131561,131563,131565:2:131587,131591,131593,131595,131599:2:131605,131609,131613:2:131621,131625:2:131655,131667:2:131671,131675:2:131685,131689,131693,131701:2:131709,131727,131731,131735:2:131743,131747,131749,131755,131761,131769,131775,131779,131783,131793,131795,131797,131803,131805,131807,131811,131813,131823,131825,131827,131831,131837,131851,131859,131865,131869:2:131889,131893,131895,131901,131907,131911,131913:2:131919,131923:2:131929,131935,131939,131941,131943,131947,131949,131951,131955:2:131965,131971,131973,131975,131981,131989,131991,131993,132003,132009,132017,132021,132023,132031:2:132039,132043,132051,132055,132057,132059,132063:2:132067,132071:2:132079,132083:2:132089,132093,132097:2:132107,132111,132113,132117,132119,132123,132125,132129:2:132153,132157,132161:2:132171,132187,132193,132195,132203,132207,132213,132217,132221,132225,132245,132265,132269,132275:2:132281,132299,132523,132533,132543,132563,132575,132313
98 pending 41259,41261,41264,42038:42040
99 miscellaneous 19,21,35:45,53:55,68,96,120,200,393,757,1647,2129,3060,3061,3066,3077,3081:3082,3090,3137,3166,4081,4093,4096,4206,4238,4248,4257,4286,4288:4289,4293,4295,5074,5075,5080,5081,5214,5253,5270,5987:5988,5991,6023,6025,6334,10145,10697,12139:12141,12148,12187,12188,12223,12224,12253,12254,12291,12323,12623,12624,12651:12654,12658,12663,12664,12671,12688,12695,12699,12700,12704,12706,12848,12851,12854,20012:20014,20024:20025,20031:20032,20035,20041:20054,20058:20059,20061:20062,20072,20077:20081,20083,20114:20115,20158,20201:20227,20249:20253,20400,21003,21023,21069,21611,21621,21622,21625,21631,21634,21642,21651,21661:21666,21671,21711,21721:21723,21725,21731:21734,21736,21738,21741,21742,21751,21761:21766,21771,21811,21821:21823,21825,21831:21834,21836,21838,21841:21842,21851,21861:21866,21871,22499,22500,22600:22603,22617,22660:22664,23048,23160,25747:25753,30001:10:30301,30002:10:30302,30003:10:30303,30004:10:30304,30354,30502:10:30522,30532,30601:10:30891,30615,30622,30635,30645,30665,30666,30692,30725,30755,30775,30795,30796,30805,30806,30825,30826,30835,30845,30855,30856,30875,30885,30895,30897,40000,105010,105030,110005,110006,110008
99 miscellaneous 19,21,35:45,53:55,68,96,120,200,393,757,1647,2129,3060,3061,3066,3077,3081:3082,3090,3132,3137,3166,4081,4093,4096,4206,4238,4248,4257,4286,4288:4289,4293,4295,5074,5075,5080,5081,5214,5253,5270,5987:5988,5991,6023,6025,6334,10145,10697,12139:12141,12148,12187,12188,12223,12224,12253,12254,12291,12323,12623,12624,12651:12654,12658,12663,12664,12671,12688,12695,12699,12700,12704,12706,12848,12851,12854,20012:20014,20024:20025,20031:20032,20035,20041:20054,20058:20059,20061:20062,20072,20077:20081,20083,20114:20115,20158,20201:20227,20249:20254,20259,20260,20263,20400,21003,21011:21018,21023,21069,21611,21621,21622,21625,21631,21634,21642,21651,21661:21666,21671,21711,21721:21723,21725,21731:21734,21736,21738,21741,21742,21751,21761:21766,21771,21811,21821:21823,21825,21831:21834,21836,21838,21841:21842,21851,21861:21866,21871,22499,22500,22600:22603,22617,22660:22664,23048,23160:23164,25747:25753,30001:10:30301,30002:10:30302,30003:10:30303,30004:10:30304,30354,30502:10:30522,30532,30601:10:30891,30615,30622,30635,30645,30665,30666,30692,30725,30755,30775,30795,30796,30805,30806,30825,30826,30835,30845,30855,30856,30875,30885,30895,30897,40000,90001,90004,105010,105030,110005,110006,110008
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