From 4b8122b7a7f6f31bcd4191320bcb09511add5d38 Mon Sep 17 00:00:00 2001
From: Matthew Webster <mwebster@fmrib.ox.ac.uk>
Date: Thu, 3 Apr 2008 12:24:46 +0000
Subject: [PATCH] Identity to IdentityMatrix

---
 fsl_glm.cc | 2 +-
 ggmix.cc   | 2 +-
 meldata.cc | 2 +-
 melgmix.cc | 2 +-
 melica.cc  | 6 +++---
 5 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/fsl_glm.cc b/fsl_glm.cc
index e1f9873..900c656 100644
--- a/fsl_glm.cc
+++ b/fsl_glm.cc
@@ -185,7 +185,7 @@ int setup(){
 			return 1;
 		}
 	}else{
-		contrasts = Identity(design.Ncols());
+		contrasts = IdentityMatrix(design.Ncols());
 		contrasts &= -1.0 * contrasts;
 	}
 	return 0;	
diff --git a/ggmix.cc b/ggmix.cc
index d14d7fe..df6e4bd 100644
--- a/ggmix.cc
+++ b/ggmix.cc
@@ -490,7 +490,7 @@ namespace GGMIX{
       }
     }
 
-    dlm += Identity(nummix)*dlm.Maximum();
+    dlm += IdentityMatrix(nummix)*dlm.Maximum();
 
     int i,j;
     float val;
diff --git a/meldata.cc b/meldata.cc
index a1115ec..4b2ffa3 100644
--- a/meldata.cc
+++ b/meldata.cc
@@ -268,7 +268,7 @@ namespace Melodic{
 
     if(numfiles == 1){
       Data = alldat;
-      Matrix tmp = Identity(Data.Nrows());
+      Matrix tmp = IdentityMatrix(Data.Nrows());
       DWM.push_back(tmp);
       WM.push_back(tmp);
     } 
diff --git a/melgmix.cc b/melgmix.cc
index 42bcaae..66d3d05 100644
--- a/melgmix.cc
+++ b/melgmix.cc
@@ -468,7 +468,7 @@ namespace Melodic{
       }
     }
 
-    dlm += Identity(nummix)*dlm.Maximum();
+    dlm += IdentityMatrix(nummix)*dlm.Maximum();
 
     int i,j;
     float val;
diff --git a/melica.cc b/melica.cc
index 9956837..cd53299 100644
--- a/melica.cc
+++ b/melica.cc
@@ -270,7 +270,7 @@ namespace Melodic{
     int itt_ctr=1; 
     double minAbsSin = 1.0;
     Matrix Id;
-    Id = Identity(redUMM.Ncols());
+    Id = IdentityMatrix(redUMM.Ncols());
     //cerr << " nonlinearity : " <<    opts.nonlinearity.value() << endl;
 
     do{ // da loop!!!
@@ -314,7 +314,7 @@ namespace Melodic{
     int dim_sym = (int) (dim*(dim+1))/2;  
     int num_CM = dim_sym;
     Matrix CM;
-    Matrix R; R = Identity(dim);
+    Matrix R; R = IdentityMatrix(dim);
     Matrix Qij; Qij = zeros(dim);
     Matrix Xim;
     Matrix Xjm;
@@ -336,7 +336,7 @@ namespace Melodic{
     }
 
     write_ascii_matrix("CM",CM);
-    Matrix redUMM; redUMM = Identity(dim);
+    Matrix redUMM; redUMM = IdentityMatrix(dim);
   
     bool exitloop = false;
     int ctr_itt = 0;
-- 
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