diff --git a/melodic.tcl b/melodic.tcl index 8365e634fb5fe525f22f018e9b77eee95cf5617a..5250167417d8c4684fcec7fecb41f7ae6da720aa 100644 --- a/melodic.tcl +++ b/melodic.tcl @@ -506,7 +506,7 @@ if { $fmri(st) > 0 } { #{{{ motion correction if { $fmri(mc) != 0 } { - fsl:exec "${FSLDIR}/bin/mcflirt -in $INPUT -out prefiltered_func_data_mcf -refvol $target_vol_number" C + fsl:exec "${FSLDIR}/bin/mcflirt -in $INPUT -out prefiltered_func_data_mcf -refvol $target_vol_number" -r set INPUT prefiltered_func_data_mcf }