diff --git a/fsl_course/segmentation/siena/feedsRun.siena b/fsl_course/segmentation/siena/feedsRun.siena index 2f9c47b4498c8df84b950e281ef9b23797197c49..24bfe6b52ab33cbfa545a143398ea12a644a48db 100755 --- a/fsl_course/segmentation/siena/feedsRun.siena +++ b/fsl_course/segmentation/siena/feedsRun.siena @@ -4,7 +4,7 @@ outdir=$1 datadir=$2 cd $outdir -cp $datadir/sub3m0.nii.gz . -cp $datadir/sub3m24.nii.gz . +cp $datadir/fsl_course_data/seg_struc/siena/sub3m0.nii.gz . +cp $datadir/fsl_course_data/seg_struc/siena/sub3m24.nii.gz . siena sub3m0 sub3m24 -d -m -b -30 diff --git a/fsl_course/segmentation/siena/feedsRun.sienax b/fsl_course/segmentation/siena/feedsRun.sienax index 529ac3941cd9c1cd1c2d1d20c5ba850da6d90767..c14cfd98e4fc3bc14287414df943de1ffcf2bfe7 100755 --- a/fsl_course/segmentation/siena/feedsRun.sienax +++ b/fsl_course/segmentation/siena/feedsRun.sienax @@ -4,6 +4,6 @@ outdir=$1 datadir=$2 cd $outdir -cp $datadir/sub3m0.nii.gz . +cp $datadir/fsl_course_data/seg_struc/siena/sub3m0.nii.gz . sienax sub3m0 -d -b -30 -r