From 5e8220fa65e61e3ac2e9e94ff7e7c3816053ce33 Mon Sep 17 00:00:00 2001
From: Michiel Cottaar <MichielCottaar@protonmail.com>
Date: Wed, 19 Aug 2020 15:16:34 +0100
Subject: [PATCH] BUG: store the filename, not the data in bvecs_fn
---
unit_tests/fdt/dtifit/feedsRun | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/unit_tests/fdt/dtifit/feedsRun b/unit_tests/fdt/dtifit/feedsRun
index 443a190..bea1b60 100755
--- a/unit_tests/fdt/dtifit/feedsRun
+++ b/unit_tests/fdt/dtifit/feedsRun
@@ -68,7 +68,7 @@ def gen_data():
bvals[25:] = 2000.
bvals[::10] = 0.
- bvecs_fn = np.genfromtxt(os.path.join(OUTDIR, "bvecs"))
+ bvecs_fn = os.path.join(OUTDIR, "bvecs")
run(['gps', '--ndir=50', '--out={}'.format(bvecs_fn)], check=True)
bvecs = np.genfromtxt(bvecs_fn)
assert bvecs.shape == (50, 3), f"GPS produced bvecs-file with shape {bvecs.shape} rather than the expected (50, 3)"
--
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