From 7e06a6ba5243ea309de703abf1021cad5bba589e Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Mon, 30 May 2022 11:57:47 +0100
Subject: [PATCH] BF: get nthreads from basename, not full executable path
---
eddy/runEddy | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/eddy/runEddy b/eddy/runEddy
index fb7a0da..0484ef1 100755
--- a/eddy/runEddy
+++ b/eddy/runEddy
@@ -76,7 +76,7 @@ do
# into eddy_cpu --nthr=N
fsl_sub="fsl_sub -l ${outdir} -q long.q"
exe="${exe_name%_nthr*}"
- nthr="${exe_name#eddy_cpu_nthr_}"
+ nthr="${variant#eddy_cpu_nthr_}"
eddy_args+=("--nthr=${nthr}")
if [ "${nthr}" != "1" ]; then
fsl_sub="${fsl_sub} -s openmp,${nthr}"
--
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