From ee2d93750d3afc8272168fc064716e7e84b65417 Mon Sep 17 00:00:00 2001
From: Matthew Webster <mwebster@jalapeno.cluster.fmrib.ox.ac.uk>
Date: Fri, 25 Oct 2024 16:13:42 +0100
Subject: [PATCH] BF: Original paths/files don't exist in our datasets
---
unit_tests/fdt/vecreg/feedsRun | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/unit_tests/fdt/vecreg/feedsRun b/unit_tests/fdt/vecreg/feedsRun
index 771aee1..49bea9f 100755
--- a/unit_tests/fdt/vecreg/feedsRun
+++ b/unit_tests/fdt/vecreg/feedsRun
@@ -19,11 +19,11 @@ def main():
fsldir = Path(os.environ['FSLDIR'])
outdir = Path(sys.argv[1])
indir = Path(sys.argv[2])/'fsl_course_data'/'fdt2'
- dyads = indir/'diffusion.bedpostX'/'dyads1.nii.gz'
+ dyads = indir/'subj1.bedpostX'/'dyads1.nii.gz'
std = fsldir/'data'/'standard'/'MNI152_T1_2mm.nii.gz'
- str2std = indir/'diffusion.bedpostX'/'xfms'/'str2standard.mat'
- diff2str = indir/'structural'/'xfms'/'diff2str.mat'
- diff2std_warp = indir/'structural'/'xfms'/'diff2standard_warp.nii.gz'
+ str2std = indir/'subj1.bedpostX'/'xfms'/'str2standard.mat'
+ diff2str = indir/'subj1.bedpostX'/'xfms'/'diff2str.mat'
+ diff2std_warp = indir/'subj1.bedpostX'/'xfms'/'diff2standard_warp.nii.gz'
# Create diff2std/std2diff affines
std2diff = outdir/'std2diff.mat'
--
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