diff --git a/getting_started/08_scripts.md b/getting_started/08_scripts.md index 930c28d35fc50e9d22cabff751378f5673b54031..1f122028908d3a2b831f5a05c8c1f7430a84f597 100644 --- a/getting_started/08_scripts.md +++ b/getting_started/08_scripts.md @@ -64,8 +64,9 @@ import os fsldir = os.getenv('FSLDIR') spobj = sp.run([fsldir+'/bin/fslstats', fsldir+'/data/standard/MNI152_T1_1mm_brain', '-V'], stdout = sp.PIPE) sout = spobj.stdout.decode('utf-8') -vol_vox = float(sout.split()[0]) -vol_mm = float(sout.split()[1]) +results = sout.split() +vol_vox = float(results[0]) +vol_mm = float(results[1]) print('Volumes are: ', vol_vox, ' in voxels and ', vol_mm, ' in mm') ``` @@ -144,8 +145,9 @@ spobj = sp.run([fsldir+'/bin/fslmaths', infile, '-mas', fsldir+'/data/standard/M # calculate volumes of masked image spobj = sp.run([fsldir+'/bin/fslstats', outfile, '-V'], stdout = sp.PIPE) sout = spobj.stdout.decode('utf-8') -vol_vox = float(sout.split()[0]) -vol_mm = float(sout.split()[1]) +results = sout.split() +vol_vox = float(results[0]) +vol_mm = float(results[1]) print('Volumes are: ', vol_vox, ' in voxels and ', vol_mm, ' in mm') ```