diff --git a/NOTES b/NOTES index f3a6ed8f2e4aa3d7d677316553b1f41a0a94a03b..3f135282520475e7d179e36f82592acdd9166ee7 100644 --- a/NOTES +++ b/NOTES @@ -1,3 +1,13 @@ siena_diff - cannot compile with optimisation turned on (gcc bug) +37744 nonzero voxels in avg152T1_edges +say 20000 real edge voxels (ignoring corner points) + +smooth with sigma=10mm=5voxels +thus 1 resel = approx 100 voxels +but intrinsic smoothness factor = 2 +-> 200 voxels + +thus bonf correct by factor of 100 +thus uncorrected 0.05 -> 0.0002 -> z=3.7 diff --git a/siena_diff.c b/siena_diff.c index bfb8ad63c62d51e7d2da2a9229fa24e59c9e20c3..fe916eca8a4748b57e9fc8e354b01a0e4c0df682 100644 --- a/siena_diff.c +++ b/siena_diff.c @@ -601,6 +601,7 @@ seg1=im.i; for(x=0;x<size;x++) if (seg1[x]>1) + /*if (seg1[x]>2)*/ seg1[x]=1; else seg1[x]=0;