diff --git a/Makefile b/Makefile
index e874116bf9de3436299a81ab8a255125d61c1099..5b4485fc0185173b4f879da7a711250293da3a44 100644
--- a/Makefile
+++ b/Makefile
@@ -1,10 +1,9 @@
-include $(FSLDIR)/etc/default.mk
+include $(FSLCONFDIR)/default.mk
 
 PROJNAME = slicetimer
 
 OBJS = slicetimer.o
 
-USRINCFLAGS = -I${INCDIR}/newimage -I${INCDIR}/miscmaths -I${INCDIR}/avwio -I${INCDIR}/newmat -I${INCDIR}/libprob -I${INCDIR}/utils	 
 LIBS = -lnewimage -lmiscmaths -lavwio -lnewmat -lprob -lm -lutils
 
 XFILES = slicetimer